Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- PNCS007087 |
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Putative Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- PNCS007087 RM systems
Ref: Schonfeld,J. et al. unpublished
REBASE ref # 28592
| Sequence length: | GenBank #: | |
| Chromosome: | 4,787,290 bp | CP044957 |
| plasmid pPNCS007087.1: | 247,576 bp | CP044958 |
| plasmid pPNCS007087.2: | 93,838 bp | CP044959 |
| plasmid pPNCS007087.3: | 91,139 bp | CP044960 |
REBASE acronym: Sen7087
Org_num: 35684
All begin E5O00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23000 | endoribonuclease SymE | |||
| 23005 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen7087ORF23010P |
| 23010 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen7087ORF23010P |
| 23015 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen7087ORF23010P |
| 23020 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10075 | drug/metabolite exporter YedA | |||
| 10080 | V | V.StyUK1DcmP (100% identity) | V.Sen7087DcmP | |
| 10085 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen7087DcmP |
| 10090 | phosphohydrolase | |||
| 10325 | RusA family crossover junction | |||
| 10330 | M | M.StyUK1V (100% identity) | GATC | M.Sen7087ORF10330P |
| 10335 | PerC family transcriptional regulator | |||
| 17235 | DNA-binding transcriptional regulator Fis | |||
| 17240 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen7087ORF17240P |
| 17245 | DUF2556 domain-containing protein | |||
| 17725 | ribulose-phosphate 3-epimerase | |||
| 17730 | M | M.StyTDamP (100% identity) | GATC | M.Sen7087DamP |
| 17735 | cell division protein DamX | |||
| 22850 | AAA family ATPase | |||
| 22855 | RM | StyUK1IV (100% identity) | GATCAG | Sen7087ORF22855P |
| 22860 | BREX system P-loop protein BrxC | |||
| plasmid pPNCS007087.1 | ||||
| 23440 | 56 aa hypothetical protein | |||
| 23445 | M | M.StyCORF187P (100% identity) | M.Sen7087ORF23445P | |
| 23450 | thermonuclease family protein | |||
| 24030 | DNA-binding protein | |||
| 24035 | M | M.Ype21801ORF197P (100% identity) | M.Sen7087ORF24035P | |
| 24040 | 273 aa hypothetical protein | |||
| plasmid pPNCS007087.2 | ||||
| 25180 | 73 aa hypothetical protein | |||
| 25185 | M | M.StyUK1ORFAP (100% identity) | M.Sen7087ORF25185P | |
| 25190 | 62 aa hypothetical protein | |||
| plasmid pPNCS007087.3 | ||||
| 25885 | 73 aa hypothetical protein | |||
| 25890 | M | M.SspPIBORF23080P (100% identity) | M.Sen7087ORF25890P | |
| 25895 | 102 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | MFS transporter | |||
| 1810 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen7087ORF1810P |
| 1815 | R | SenSW37ORF16990P (100% identity) | CAGAG | Sen7087ORF1810P |
| 1820 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23015 | type I restriction-modification system | |||
| 23020 | R | StyUK1MrrP (100% identity) | Sen7087MrrP | |
| 23025 | BrnT family toxin | |||