Enterobacter kobei C16 |
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Putative Enterobacter kobei C16 RM systems
Ref: Phan,H.T.T. et al. unpublished
REBASE ref # 28955
| Sequence length: | GenBank #: | |
| Chromosome: | 4,964,300 bp | CP042578 |
| plasmid pC16_001: | 275,807 bp | CP042579 |
| plasmid pC16_003: | 44,630 bp | CP042581 |
REBASE acronym: EkoC16
Org_num: 36959
All begin FR825_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2500 | IS3-like element ISSen4 family transposase | |||
| 2505 | M | M.EkoCRE18ORF20170P (94% identity) | CATCNNNNNNTCC | M.EkoC16ORF2505P |
| 2510 | S | S1.EkoCRE18ORF20170P (100% identity) | CATCNNNNNNTCC | S.EkoC16ORF2505P |
| 2515 | R | EkoCRE18ORF20170P (100% identity) | CATCNNNNNNTCC | EkoC16ORF2505P |
| 2520 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13885 | DUF1317 family protein | |||
| 13890 | M | M1.EspB01ORF18715P (100% identity) | M.EkoC16ORF13890P | |
| 13895 | DNA methyltransferase | |||
| 13890 | class I SAM-dependent methyltransferase | |||
| 13895 | M | M.EkoC16ORF17285P (100% identity) | M.EkoC16ORF13895P | |
| 13900 | TraR/DksA family transcriptional regulator | |||
| 14550 | drug/metabolite exporter YedA | |||
| 14555 | V | V.EspT2DcmP (100% identity) | V.EkoC16DcmP | |
| 14560 | M | M.EspB01DcmP (100% identity) | CCWGG | M.EkoC16DcmP |
| 14565 | phosphohydrolase | |||
| 17275 | DUF1317 family protein | |||
| 17280 | M | M1.EspB01ORF18715P (99% identity) | M.EkoC16ORF17280P | |
| 17285 | DNA methyltransferase | |||
| 17280 | class I SAM-dependent methyltransferase | |||
| 17285 | M | M.EkoC16ORF13895P (100% identity) | M.EkoC16ORF17285P | |
| 17290 | TraR/DksA family transcriptional regulator | |||
| 22470 | ribulose-phosphate 3-epimerase | |||
| 22475 | M | M.EspT2DamP (94% identity) | GATC | M.EkoC16DamP |
| 22480 | cell division protein DamX | |||
| plasmid pC16_001 | ||||
| 25490 | nuclease | |||
| 25495 | M | M.Ssp15303DcmP (100% identity) | M.EkoC16Dcm2P | |
| 25500 | DUF1173 domain-containing protein | |||
| 25740 | 106 aa hypothetical protein | |||
| 25745 | M | M.Ssp15303ORFDP (100% identity) | M.EkoC16ORF25745P | |
| 25750 | 202 aa hypothetical protein | |||
| 25885 | DNA-binding protein | |||
| 25890 | M | M.Ssp15303ORFEP (100% identity) | M.EkoC16ORF25890P | |
| 25895 | 284 aa hypothetical protein | |||
| plasmid pC16_003 | ||||
| 26555 | resolvase | |||
| 26560 | R | YpsR1ORFAP (99% identity) | CCWGG | EkoC16ORF26565P |
| 26565 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EkoC16ORF26565P |
| 26570 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2520 | M48 family metallopeptidase | |||
| 2525 | R | EkoCRE18MrrP (100% identity) | EkoC16MrrP | |
| 2530 | GIY-YIG nuclease family protein | |||