Serratia marcescens E28 |
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Putative Serratia marcescens E28 RM systems
Ref: Phan,H.T.T. et al. unpublished
REBASE ref # 28955
| Sequence length: | GenBank #: | |
| Chromosome: | 5,419,694 bp | CP042512 |
| plasmid pE28_001: | 186,249 bp | CP042513 |
REBASE acronym: SmaE28
Org_num: 36127
All begin FR888_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2390 | DeoR/GlpR transcriptional regulator | |||
| 2400 | R | SmaK17ORF2970P (95% identity) | SmaE28ORF2410P | |
| 2405 | S | S.Sma6556ORF2450P (100% identity) | S.SmaE28ORF2410P | |
| 2410 | M | M.Sma6556ORF2450P (100% identity) | M.SmaE28ORF2410P | |
| 2415 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5410 | tyrosine-type recombinase/integrase | |||
| 5415 | M | M.Sma854ORF3545P (100% identity) | M.SmaE28ORF5415P | |
| 5420 | 59 aa hypothetical protein | |||
| 8885 | 68 aa hypothetical protein | |||
| 8890 | M | M.SmaK17ORF10260P (94% identity) | M.SmaE28ORF8890P | |
| 8895 | 79 aa hypothetical protein | |||
| 17220 | DUF968 domain-containing protein | |||
| 17225 | M | M.SmaE28ORF17825P (100% identity) | M.SmaE28ORF17225P | |
| 17230 | 80 aa hypothetical protein | |||
| 17520 | DUF968 domain-containing protein | |||
| 17525 | M | M.SmaE28ORF17825P (100% identity) | M.SmaE28ORF17525P | |
| 17530 | 80 aa hypothetical protein | |||
| 17820 | DUF968 domain-containing protein | |||
| 17825 | M | M.SmaE28ORF17525P (100% identity) | M.SmaE28ORF17825P | |
| 17830 | 80 aa hypothetical protein | |||
| 24610 | ribulose-phosphate 3-epimerase | |||
| 24615 | M | M.SspNIH1Dam (100% identity) | GATC | M.SmaE28DamP |
| 24620 | SPOR domain-containing protein | |||
| plasmid pE28_001 | ||||
| 26795 | 297 aa hypothetical protein | |||
| 26800 | M | M.Sma4201ORF25600P (100% identity) | M.SmaE28ORF26800P | |
| 26805 | 62 aa hypothetical protein | |||
| 27355 | 73 aa hypothetical protein | |||
| 27360 | M | M.SmaQC11ORF52800P (100% identity) | M.SmaE28ORF27285P | |
| 27365 | 70 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2410 | type I restriction-modification system subunit | |||
| 2415 | R | Sma6556MrrP (100% identity) | SmaE28MrrP | |
| 2420 | HNH endonuclease | |||