Escherichia coli ERL03-1416 |
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Putative Escherichia coli ERL03-1416 RM systems
Ref: Bono,J.L. and On,S.L.W. unpublished
REBASE ref # 29307
| Sequence length: | GenBank #: | |
| Chromosome: | 5,427,778 bp | CP032811 |
| plasmid pERL03-1416-1: | 90,979 bp | CP032812 |
| plasmid pERL03-1416-2: | 62,779 bp | CP032813 |
REBASE acronym: Eco1416
Org_num: 36709
All begin D8Z67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24635 | DUF262 domain-containing protein | |||
| 24640 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1416ORF24645P |
| 24645 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco1416ORF24645P |
| 24650 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1416ORF24645P |
| 24655 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2500 | protein DamX | |||
| 2505 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1416DamP |
| 2510 | ribulose-phosphate 3-epimerase | |||
| 3040 | DUF2556 domain-containing protein | |||
| 3045 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1416ORF3045P |
| 3050 | Fis family transcriptional regulator | |||
| 7865 | DUF1382 family protein | |||
| 7870 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1416ORF7870P |
| 7875 | regulator | |||
| 8000 | Ash family protein | |||
| 8005 | R | Sso1099IP (100% identity) | CTGCAG | Eco1416ORF8010P |
| 8010 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco1416ORF8010P |
| 8015 | LexA family transcriptional regulator | |||
| 11380 | phosphohydrolase | |||
| 11385 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1416DcmP |
| 11390 | V | V.EcosPA8DcmP (100% identity) | V.Eco1416DcmP | |
| 11395 | drug/metabolite exporter YedA | |||
| 15760 | 61 aa hypothetical protein | |||
| 15775 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1416ORF15775P | |
| 15780 | lipoprotein | |||
| 24900 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1416ORF24900P |
| 24905 | DEAD/DEAH box helicase | |||
| 24935 | N-acetylneuraminate epimerase | |||
| 24940 | R | EcosPA8ORF17350P (100% identity) | Eco1416ORF24940P | |
| 24945 | transposase | |||
| plasmid pERL03-1416-1 | ||||
| 28270 | 101 aa hypothetical protein | |||
| 28275 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1416ORF28275P | |
| 28280 | 73 aa hypothetical protein | |||
| plasmid pERL03-1416-2 | ||||
| 28565 | 59 aa hypothetical protein | |||
| 28570 | M | M.Eho4ORF23420P (96% identity) | M.Eco1416ORF28570P | |
| 28575 | 73 aa hypothetical protein | |||