Paracoccus pantotrophus DSM 2944 |
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Putative Paracoccus pantotrophus DSM 2944 RM systems
Ref: Bockwoldt,J.A. et al. unpublished
REBASE ref # 29916
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,248,278 bp | CP044426 |
| chromosome 2: | 1,525,820 bp | CP044423 |
| plasmid pPAN1: | 99,949 bp | CP044424 |
| plasmid pPAN2: | 535,332 bp | CP044425 |
REBASE acronym: Ppa2944
Org_num: 38458
All begin ESD82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPAN1 | ||||
| 7770 | ISL3 family transposase | |||
| 7775 | R | Bmu503ORF29405P (97% identity) | Ppa2944ORF7795P | |
| 7780 | 125 aa hypothetical protein | |||
| ??? | S | S2.AspSHORF13005P (44% identity) | S.Ppa2944ORF7795P | |
| 7790 | DUF262 domain-containing protein | |||
| 7795 | M | M.Bmu503ORF29405P (94% identity) | M.Ppa2944ORF7795P | |
| 7800 | 81 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 17470 | alkane 1-monooxygenase | |||
| 17475 | M | M.Ppa11072ORF10010P (99% identity) | M.Ppa2944ORF17475P | |
| 17480 | ribonuclease HII | |||
| 18645 | 716 aa hypothetical protein | |||
| 18650 | M | M.PdeR1ORF9295P (62% identity) | M.Ppa2944ORF18650P | |
| 18655 | 96 aa hypothetical protein | |||
| 20080 | DNA polymerase III subunit beta | |||
| 20085 | M | M2.Ppa2944ORF3635P (98% identity) | M.Ppa2944ORF20085P | |
| 20090 | 142 aa hypothetical protein | |||
| 20875 | 72 aa hypothetical protein | |||
| 20880 | M | M.Pfe100066ORF3315P (93% identity) | M.Ppa2944ORF20880P | |
| 20885 | HNH endonuclease | |||
| chromosome 2 | ||||
| 3630 | 115 aa hypothetical protein | |||
| 3635 | M | M.Ppa10489ORF17270P (91% identity) | M1.Ppa2944ORF3635P | |
| 3640 | 113 aa hypothetical protein | |||
| 3645 | 139 aa hypothetical protein | |||
| 3650 | M | M.Ppa2944ORF20085P (98% identity) | M2.Ppa2944ORF3635P | |
| 3655 | DNA polymerase III subunit beta | |||
| plasmid pPAN2 | ||||
| 8280 | recombinase family protein | |||
| 8285 | M | M.Psa18447ORF10570P (34% identity) | M.Ppa2944ORF8285P | |
| 8290 | 259 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 20795 | WYL domain-containing protein | |||
| 20800 | M | M.Ssp067ORF5745P (69% identity) | M.Ppa2944ORF20800P | |
| 20805 | hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 20955 | Fic family protein | |||
| 20960 | R | Pfe100066McrBP (61% identity) | Ppa2944McrBP | |
| 20965 | R | Rth16684McrCP (95% identity) | Ppa2944McrCP | |
| 20980 | uncharacterized protein | |||