Rhodobacteraceae bacterium La 6 |
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Putative Rhodobacteraceae bacterium La 6 RM systems
Ref: Howat,A.M. et al. Front Microbiol 9, 766 (2018)
REBASE ref # 29968
| Sequence length: | GenBank #: | |
| Chromosome: | 5,560,560 bp | CP031585 |
| plasmid pLA6_006: | 114,798 bp | CP031591 |
| plasmid pLA6_010: | 33,866 bp | CP031595 |
REBASE acronym: RbaLa6
Org_num: 38671
All begin LA6_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLA6_006 | ||||
| 6075 | ribonuclease FitB | |||
| 6076 | R | Psp4604IIP (98% identity) | RbaLa6ORF6077P | |
| 6077 | M | M.Pst25392ORF6880P (97% identity) | M.RbaLa6ORF6077P | |
| 6078 | S | S.RspNI22ORF6035P (95% identity) | S.RbaLa6ORF6077P | |
| 6079 | 255 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 266 | Ribonuclease HII | |||
| 267 | M | M.CspNS6I (83% identity) | M.RbaLa6ORF267P | |
| 268 | 200 aa hypothetical protein | |||
| 1991 | 97 aa hypothetical protein | |||
| 1992 | R | RbaM385ORF11390P (67% identity) | RbaLa6ORF1992P | |
| 1993 | Serine acetyltransferase | |||
| 2573 | Site-specific recombinase XerD | |||
| 2574 | M | M.HspM1SspCP (38% identity) | M.RbaLa6SspCP | |
| 2575 | M | M.HspM1SspBP (74% identity) | M.RbaLa6SspBP | |
| 2576 | Cysteine desulfurase | |||
| 2575 | 312 aa hypothetical protein | |||
| 2576 | M | M.BspSL130DndAP (36% identity) | M.RbaLa6DndAP | |
| 2577 | 66 aa hypothetical protein | |||
| 3425 | terminase ATPase subunit | |||
| 3426 | M | M.MalKU6BORF36640P (73% identity) | M.RbaLa6ORF3426P | |
| 3427 | Mu-like prophage protein gp29 | |||
| plasmid pLA6_010 | ||||
| 6433 | Abi-like protein | |||
| 6434 | R | SspMA2ORF27570P (77% identity) | RbaLa6ORF6435P | |
| ??? | V | V.JspC01ORF8015P (51% identity) | V.RbaLa6ORF6435P | |
| 6435 | M | M.SspMA2ORF27570P (82% identity) | M.RbaLa6ORF6435P | |
| 6436 | DNA strand transferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4892 | magnesium protoporphyrin O-methyltransferase | |||
| 4893 | R | SspMA2ORF1190P (97% identity) | RbaLa6ORF4893P | |
| 4894 | Beta-ketoacyl-acyl-carrier-protein synthase I | |||