Caproiciproducens galactitolivorans BS-1 |
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Putative Caproiciproducens galactitolivorans BS-1 RM systems
Ref: Kim,B.C. et al. Int. J. Syst. Evol. Microbiol. 65 (12), 4902-4908 (2015)
REBASE ref # 29636
Complete sequence: 2,600,032 bp
GenBank #: CP041369
REBASE acronym: CgaBS1
Org_num: 37598
All begin FL966_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10415 | helix-turn-helix transcriptional regulator | |||
| 10420 | M | M.Efa0037ORFBP (97% identity) | DGAGNNNNNTGA | M.CgaBS1III |
| 10425 | S | S.Csp356ORF2049P (65% identity) | DGAGNNNNNTGA | S1.CgaBS1III |
| 10430 | 68 aa hypothetical protein | |||
| 10435 | tyrosine-type recombinase/integrase | |||
| 10440 | S | S3.Gel1559ORF3870P (42% identity) | S2.CgaBS1IIIP | |
| 10445 | S | S3.Lgi7582ORF4015P (78% identity) | S3.CgaBS1IIIP | |
| 10450 | R | PmeBin193ORFDP (96% identity) | DGAGNNNNNTGA | CgaBS1IIIP |
| 10455 | AAA family ATPase | |||
| 10850 | helix-turn-helix domain-containing protein | |||
| 10855 | M | M.PmeBin187ORFGP (81% identity) | AGCNNNNNNGGT | M.CgaBS1II |
| 10860 | S | S.BceDLOUORFBP (57% identity) | AGCNNNNNNGGT | S.CgaBS1II |
| 10865 | R | CspWCF2IP (82% identity) | AGCNNNNNNGGT | CgaBS1IIP |
| 10870 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 450 | DUF554 domain-containing protein | |||
| 455 | RM | CspCPB2ORF6075P (62% identity) | CgaBS1ORF455P | |
| 460 | HAD family phosphatase | |||
| 1690 | single-stranded DNA-binding protein | |||
| 1695 | M | M.CbaBL6ORF775P (87% identity) | M.CgaBS1ORF1695P | |
| 1700 | 103 aa hypothetical protein | |||
| 8185 | 85 aa hypothetical protein | |||
| 8190 | M | M.Sgl8271ORF47P (90% identity) | M.CgaBS1ORF8190P | |
| 8195 | DUF4406 domain-containing protein | |||
| 8330 | 190 aa hypothetical protein | |||
| 8335 | M | M.Sgl8271ORF76P (100% identity) | M.CgaBS1ORF8335P | |
| 8340 | 110 aa hypothetical protein | |||
| 10795 | head-tail adaptor protein | |||
| 10800 | S | S2.Rho2517ORFHP (34% identity) | CGANNNNNNTGA | S.CgaBS1I |
| 10805 | RM | CklJZZORF17835P (59% identity) | CGANNNNNNTGA | CgaBS1I |
| 10810 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | 228 aa hypothetical protein | |||
| 3555 | M | M.Cty776ORFJP (64% identity) | M.CgaBS1ORF3555P | |
| 3560 | 226 aa hypothetical protein | |||
| 3565 | R | Ova1820ORF9150P (90% identity) | CgaBS1ORF3555P | |
| 3570 | 85 aa hypothetical protein | |||
| 10895 | helix-turn-helix domain-containing protein | |||
| 10900 | R | DtuL3ORF1116P (84% identity) | CgaBS1ORF10905P | |
| 10905 | M | M.PthSORF1523P (74% identity) | M.CgaBS1ORF10905P | |
| 10910 | IS256 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10450 | type I restriction endonuclease subunit R | |||
| 10455 | R | Efa0037McrBP (92% identity) | CgaBS1McrBP | |
| 10460 | R | Efa0037McrCP (88% identity) | CgaBS1McrCP | |
| 10465 | 213 aa hypothetical protein | |||