Lactococcus lactis subsp. lactis bv. diacetylactis SD96 |
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Putative Lactococcus lactis subsp. lactis bv. diacetylactis SD96 RM systems
Ref: Dorau,R. et al. unpublished
REBASE ref # 29269
| Sequence length: | GenBank #: | |
| Chromosome: | 2,416,272 bp | CP043523 |
| plasmid pSD96_01: | 11,722 bp | CP043525 |
| plasmid pSD96_06: | 25,379 bp | CP043518 |
| plasmid pSD96_07: | 7,296 bp | CP043519 |
REBASE acronym: LlaSD96
Org_num: 36555
All begin FTN78_chr, FTN78_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 306 | Mobile element protein | |||
| 307 | R | LlaLD61ORF10850P (100% identity) | GATGNNNNNTTTA | LlaSD96ORF308P |
| 308 | M | M.LlaLD61ORF10850P (100% identity) | GATGNNNNNTTTA | M.LlaSD96ORF308P |
| 309 | S | S.LlaLD61ORF10850P (100% identity) | GATGNNNNNTTTA | S.LlaSD96ORF308P |
| 310 | 41 aa hypothetical protein | |||
| 1898 | Cold shock protein of CSP family | |||
| 1899 | R | Lla109FORFDP (99% identity) | LlaSD96ORF1906P | |
| 1900 | 105 aa hypothetical protein | |||
| 1901 | 277 aa hypothetical protein | |||
| 1902 | S | S2.LlaA12ORF1262P (42% identity) | S3.LlaSD96ORF1906P | |
| 1903 | Site-specific tyrosine recombinase | |||
| 1904 | S | S1.Spa417ORF5095P (74% identity) | S2.LlaSD96ORF1906P | |
| 1905 | S | S1.Ssp741ORF8365P (31% identity) | S1.LlaSD96ORF1906P | |
| 1906 | M | M.Lla109FORFDP (99% identity) | M2.LlaSD96ORF1906P | |
| 1907 | 600 aa hypothetical protein | |||
| plasmid pSD96_01 | ||||
| 10004 | Replication-associated protein | |||
| 10005 | S | S.LlaKF140ORF2525P (98% identity) | S.LlaSD96ORF10005P | |
| 10006 | 125 aa hypothetical protein | |||
| plasmid pSD96_06 | ||||
| 60001 | S | S1.LlaB26IIIP (66% identity) | S.LlaSD96ORF60002P | |
| 60002 | M | M.Lra4877ORF4835P (99% identity) | M.LlaSD96ORF60002P | |
| 60003 | R | Lla82I (99% identity) | LlaSD96ORF60002P | |
| 60004 | 242 aa hypothetical protein | |||
| plasmid pSD96_07 | ||||
| 70007 | 53 aa hypothetical protein | |||
| 70008 | S | S.LlaS50ORFAP (99% identity) | S.LlaSD96ORF70008P | |
| 70009 | Replication-associated protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2150 | 408 aa hypothetical protein | |||
| 2151 | M | M.LlaGe001ORF10285P (100% identity) | M.LlaSD96ORF2151P | |
| 2152 | R | LlaGe001ORF10285P (100% identity) | LlaSD96ORF2151P | |
| 2153 | 518 aa hypothetical protein LASAK_01637 | |||