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Putative Xanthomonas hortorum VT106 RM systems
Ref: Xu,D. et al. unpublished
REBASE ref # 29524
Complete sequence: 5,101,806 bp
GenBank #: CP031607
REBASE acronym: XhoVT106
Org_num: 37364
All begin DYQ48_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
16090 | 98 aa hypothetical protein | |||
16095 | R | Xho498ORF20150P (100% identity) | XhoVT106ORF16110P | |
16100 | 195 aa hypothetical protein | |||
??? | S | S.Xho498ORF20150P (100% identity) | S.XhoVT106ORF16110P | |
16105 | hydroxyacid dehydrogenase | |||
16110 | M | M.Xho9ORF16935P (100% identity) | M.XhoVT106ORF16110P | |
16115 | Mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1765 | 0 aa hypothetical protein | |||
1770 | M | M.Xho9ORF20400P (100% identity) | M.XhoVT106ORF1770P | |
1775 | R | Xho498ORF3960P (100% identity) | XhoVT106ORF1770P | |
1780 | IS1595 family transposase | |||
3335 | 276 aa hypothetical protein | |||
3340 | M | M.Xho9ORF12955P (100% identity) | M.XhoVT106ORF3340P | |
3345 | V | V.Xho7ORFAP (100% identity) | V.XhoVT106ORF3340P | |
3350 | IS30 family transposase | |||
6335 | DEAD/DEAH box helicase | |||
6340 | M | M.Xho9ORF8255P (100% identity) | M.XhoVT106ORF6340P | |
6345 | 72 aa hypothetical protein | |||
16400 | Abi family protein | |||
16405 | R | Xtr18974ORF3219P (66% identity) | XhoVT106ORF16420BP | |
16410 | IS3 family transposase | |||
16415 | R | Xtr18974ORF3219P (33% identity) | XhoVT106ORF16420AP | |
16420 | M | M.XmaII (94% identity) | M.XhoVT106ORF16420P | |
16425 | 80 aa hypothetical protein | |||
16660 | 245 aa hypothetical protein | |||
16665 | M | M.Xho9ORF9360P (100% identity) | M.XhoVT106ORF16665P | |
16675 | phage portal protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
17415 | integrase | |||
17420 | R | AfeMOR02ORF1340P (82% identity) | XhoVT106ORF17425P | |
17425 | M | M.Esp994ORF2680P (67% identity) | M.XhoVT106ORF17425P | |
17430 | DUF2130 domain-containing protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
16110 | SAM-dependent DNA methyltransferase | |||
16115 | R | Xho9Mrr2P (100% identity) | XhoVT106MrrP | |
16120 | type II toxin-antitoxin system RelE/ParE family |