Lactobacillus rhamnosus hsryfm 1301 |
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Putative Lactobacillus rhamnosus hsryfm 1301 RM systems
Ref: Zhang,C. et al. unpublished
REBASE ref # 29826
Complete sequence: 3,022,021 bp
GenBank #: CP044228
REBASE acronym: Lrh1301
Org_num: 38183
All begin F5976_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12455 | AbrB/MazE/SpoVT family DNA-binding | |||
| 12460 | R | LrhsA5ORFBP (99% identity) | Lrh1301ORF12465P | |
| 12465 | M | M.LrhsA5ORFBP (100% identity) | M.Lrh1301ORF12465P | |
| 12470 | S | S2.LrhCASLORFCP (100% identity) | S1.Lrh1301ORF12465P | |
| 12475 | site-specific integrase | |||
| 12480 | S | S2.LrhVSI43ORF9640P (96% identity) | S2.Lrh1301ORF12465P | |
| 12485 | 268 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9985 | 73 aa hypothetical protein | |||
| 9990 | M | M.Lrh5264ORF8160P (100% identity) | M.Lrh1301ORF9990P | |
| 9995 | 108 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2330 | IS5-like element ISLrh2 family transposase | |||
| 2335 | R | LrhWQ2ORF2900P (78% identity) | Lrh1301ORF2340P | |
| 2340 | M | M.LrhWQ2ORF2900P (100% identity) | M.Lrh1301ORF2340P | |
| 2345 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||