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Putative Klebsiella pneumoniae D1 RM systems
Ref: Jousset,A.B. et al. unpublished
REBASE ref # 29348
Sequence length: | GenBank #: | |
Chromosome: | 5,424,239 bp | CP043969 |
plasmid pKPC: | 113,639 bp | CP043971 |
REBASE acronym: KpnD1
Org_num: 36859
All begin F3P37_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid pKPC | ||||
28370 | 71 aa hypothetical protein | |||
28375 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnD1ORF28375P |
28380 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnD1ORF28375P |
28385 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnD1ORF28375P |
28390 | ISL3-like element ISKpn25 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3710 | drug/metabolite exporter YedA | |||
3715 | V | V.KspC31DcmP (75% identity) | V.KpnD1DcmP | |
3720 | M | M.Kqu6DcmP (82% identity) | CCWGG | M.KpnD1DcmP |
3725 | phosphohydrolase | |||
6270 | DUF1317 family protein | |||
6275 | M | M.Kpni512ORF1337P (100% identity) | M.KpnD1ORF6275P | |
6280 | 60 aa hypothetical protein | |||
7040 | replication endonuclease | |||
7045 | M | M.Ksp1927ORF4530P (100% identity) | M.KpnD1ORF7045P | |
7050 | TraR/DksA family transcriptional regulator | |||
11510 | ribulose-phosphate 3-epimerase | |||
11515 | M | M.KspC31DamP (100% identity) | GATC | M.KpnD1DamP |
11520 | cell division protein DamX | |||
16410 | 88 aa hypothetical protein | |||
16415 | R | KpnvKP9ORFAP (100% identity) | KpnD1ORF16415P | |
16420 | HNH endonuclease | |||
19735 | dcm methylase | |||
19740 | M | M.Kpss50ORF20150P (100% identity) | M.KpnD1ORF19740P | |
19745 | DUF1317 family protein | |||
22180 | TraR/DksA family transcriptional regulator | |||
22185 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.KpnD1ORF22185P |
22190 | replication endonuclease | |||
24385 | 104 aa hypothetical protein | |||
24390 | M | M.Ksp1927ORF14405P (100% identity) | M.KpnD1ORF24390P | |
24395 | regulator | |||
plasmid pKPC | ||||
29010 | 73 aa hypothetical protein | |||
29015 | M | M.SmaBWH35ORF25885P (100% identity) | M.KpnD1ORF29015P | |
29020 | hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3850 | SpnT protein | |||
3855 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.KpnD1ORF3855P |
3860 | R | Kpni512ORF1793P (100% identity) | CGCATC | KpnD1ORF3855P |
3865 | shufflon system plasmid conjugative transfer |