Lactobacillus nenjiangensis SH-Y15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus nenjiangensis SH-Y15 RM systems
Ref: Yang,H. unpublished
REBASE ref # 28983
Complete sequence: 2,207,094 bp
GenBank #: CP043939
REBASE acronym: LneY15
Org_num: 35560
All begin F0161_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6260 | IS3 family transposase | |||
| 6270 | S | restriction endonuclease subunit S | AGGNNNNNNTGC | S2.LneY15I |
| 6275 | site-specific integrase | |||
| 6280 | S | S.Pin20285ORF10455P (64% identity) | AGGNNNNNNTGC | S1.LneY15I |
| 6285 | M | M.Pda1536ORF1406P (79% identity) | AGGNNNNNNTGC | M.LneY15I |
| 6290 | R | Pin20285ORF10455P (64% identity) | AGGNNNNNNTGC | LneY15IP |
| 6295 | IS256 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 735 | (deoxy)nucleoside triphosphate | |||
| 740 | R | Lbi003ORF13125P (55% identity) | LneY15ORF740P | |
| 745 | 151 aa hypothetical protein | |||
| 6340 | helix-turn-helix transcriptional regulator | |||
| 6345 | R | LlaA12McrCP (54% identity) | LneY15McrCP | |
| 6350 | R | EfaNS2McrBP (35% identity) | LneY15McrBP | |
| 6355 | ABC transporter ATP-binding protein | |||