Escherichia coli CVM N17EC0616 |
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Putative Escherichia coli CVM N17EC0616 RM systems
Ref: Tyson,G.H. et al. unpublished
REBASE ref # 29299
| Sequence length: | GenBank #: | |
| Chromosome: | 5,075,396 bp | CP043736 |
| plasmid pN17EC0616-1: | 179,651 bp | CP043737 |
| plasmid pN17EC0616-2: | 111,317 bp | CP043738 |
REBASE acronym: EcoC0616
Org_num: 36694
All begin D9G11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9950 | IS3 family transposase | |||
| 9955 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoC0616ORF9955P |
| 9960 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoC0616ORF9955P |
| 9965 | YecA family protein | |||
| 9970 | cold shock domain-containing protein | |||
| 9975 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | EcoC0616ORF9955P |
| 9980 | M48 family metallopeptidase | |||
| 20315 | restriction endonuclease | |||
| 20320 | R | Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | EcoC0616ORF20325P |
| 20325 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoC0616ORF20325P |
| 20330 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoC0616ORF20325P |
| 20335 | endoribonuclease SymE | |||
| 21765 | transposase domain-containing protein | |||
| 21770 | S | S.SflN101ORF19075P (100% identity) | S.EcoC0616ORF21775P | |
| 21775 | M | M.Sen6640ORF2690P (100% identity) | M.EcoC0616ORF21775P | |
| 21780 | R | EmaC12ORF18910P (100% identity) | EcoC0616ORF21775P | |
| 21785 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1970 | cell division protein DamX | |||
| 1975 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0616DamP |
| 1980 | ribulose-phosphate 3-epimerase | |||
| 2505 | DUF2556 domain-containing protein | |||
| 2510 | M | M.Ecoppa2ORF6235P (100% identity) | ATGCAT | M.EcoC0616ORF2510P |
| 2515 | DNA-binding transcriptional regulator Fis | |||
| 9685 | phosphohydrolase | |||
| 9690 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.EcoC0616DcmP |
| 9695 | V | V.Ecoppa2DcmP (100% identity) | V.EcoC0616DcmP | |
| 9700 | drug/metabolite exporter YedA | |||
| plasmid pN17EC0616-1 | ||||
| 25425 | 101 aa hypothetical protein | |||
| 25430 | M | M.SflN92ORF24820P (100% identity) | M.EcoC0616ORF25430P | |
| 25435 | 73 aa hypothetical protein | |||
| plasmid pN17EC0616-2 | ||||
| 25710 | 73 aa hypothetical protein | |||
| 25715 | M | M.StyR64ORFAP (100% identity) | M.EcoC0616ORF25715P | |
| 25720 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20310 | GTPase | |||
| 20315 | R | Ssp28760MrrP (100% identity) | EcoC0616MrrP | |
| 20320 | type I restriction-modification system | |||
| 20335 | endoribonuclease SymE | |||
| 20340 | R | SenHNK130McrBP (100% identity) | EcoC0616McrBP | |
| 20345 | R | SenHNK130McrCP (100% identity) | EcoC0616McrCP | |