Escherichia coli CVM N16EC0879 |
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Putative Escherichia coli CVM N16EC0879 RM systems
Ref: Tyson,G.H. et al. unpublished
REBASE ref # 29299
| Sequence length: | GenBank #: | |
| Chromosome: | 4,936,045 bp | CP043744 |
| plasmid pN16EC0879-1: | 138,918 bp | CP043745 |
| plasmid pN16EC0879-2: | 92,183 bp | CP043746 |
REBASE acronym: EcoC0879
Org_num: 36691
All begin F1L21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9735 | IS3 family transposase | |||
| 9740 | R | EhoEh60ORF13695P (97% identity) | EcoC0879ORF9740P | |
| 9745 | M48 family metallopeptidase | |||
| 19890 | restriction endonuclease | |||
| 19895 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoC0879ORF19895P |
| 19900 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoC0879ORF19895P |
| 19905 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoC0879ORF19895P |
| 19910 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1780 | cell division protein DamX | |||
| 1785 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0879DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 domain-containing protein | |||
| 2365 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC0879ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 6095 | 257 aa hypothetical protein | |||
| 6100 | M | M.Eco203740ORFEP (97% identity) | M.EcoC0879ORF6100P | |
| 6105 | R | Sso8033ORF3755P (100% identity) | EcoC0879ORF6100P | |
| 6110 | 121 aa hypothetical protein | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.Ecostr9DcmP (100% identity) | CCWGG | M.EcoC0879DcmP |
| 9460 | V | V.SsoSE61DcmP (100% identity) | V.EcoC0879DcmP | |
| 9465 | drug/metabolite exporter YedA | |||
| 13530 | LexA family transcriptional regulator | |||
| 13535 | M | M.Eco2682ORF13190P (100% identity) | GATC | M.EcoC0879ORF13535P |
| 13540 | PerC family transcriptional regulator | |||
| 20235 | restriction endonuclease | |||
| 20240 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0879ORF20245P |
| 20245 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0879ORF20245P |
| 20250 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoC0879ORF20245P |
| 20255 | helix-turn-helix domain-containing protein | |||
| 22165 | phage lysis protein EssD | |||
| 22170 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0879ORF22170P | |
| 22175 | 67 aa hypothetical protein | |||
| 22205 | LexA family transcriptional regulator | |||
| 22210 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoC0879ORF22210P |
| 22215 | PerC family transcriptional regulator | |||
| plasmid pN16EC0879-1 | ||||
| 25085 | 102 aa hypothetical protein | |||
| 25090 | M | M.Ecowhn14ORF35P (100% identity) | M.EcoC0879ORF25090P | |
| 25095 | 73 aa hypothetical protein | |||
| plasmid pN16EC0879-2 | ||||
| 25400 | 226 aa hypothetical protein | |||
| 25405 | M | M.EcoM1586ORF26310P (99% identity) | M.EcoC0879ORF25405P | |
| 25410 | glutamine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20225 | 60 aa hypothetical protein | |||
| 20230 | R | EcosS3McrBP (100% identity) | EcoC0879McrBP | |
| 20235 | R | EcosS9McrCP (100% identity) | EcoC0879McrCP | |
| 20240 | Alw26I/Eco31I/Esp3I family type II restriction | |||