Escherichia coli CVM N56338 |
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Putative Escherichia coli CVM N56338 RM systems
Ref: Tyson,G.H. et al. unpublished
REBASE ref # 29299
Complete sequence: 4,861,564 bp
GenBank #: CP043754
REBASE acronym: Eco56338
Org_num: 36699
All begin F1L17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11975 | M48 family metallopeptidase | |||
| 11980 | R | Sen59ORF24615P (100% identity) | GATGNNNNNCTG | Eco56338ORF11990P |
| 11985 | S | S.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | S.Eco56338ORF11990P |
| 11990 | M | M.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | M.Eco56338ORF11990P |
| 11995 | helix-turn-helix transcriptional regulator | |||
| 20495 | 128 aa hypothetical protein | |||
| 20500 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco56338ORF20500P |
| 20505 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco56338ORF20500P |
| 20510 | 428 aa hypothetical protein | |||
| 20610 | WYL domain-containing protein | |||
| 20615 | R | EcohubtORF20055P (100% identity) | AACNNNNNNGTGC | Eco56338ORF20620P |
| 20620 | M | M.EcohubtORF20055P (100% identity) | AACNNNNNNGTGC | M.Eco56338ORF20620P |
| 20625 | S | S.EcohubtORF20055P (98% identity) | AACNNNNNNGTGC | S.Eco56338ORF20620P |
| 20630 | 582 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1960 | cell division protein DamX | |||
| 1965 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco56338DamP |
| 1970 | ribulose-phosphate 3-epimerase | |||
| 2515 | DUF2556 domain-containing protein | |||
| 2520 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco56338ORF2520P |
| 2525 | DNA-binding transcriptional regulator Fis | |||
| 9285 | phosphohydrolase | |||
| 9290 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco56338DcmP |
| 9295 | V | V.SsoSE61DcmP (100% identity) | V.Eco56338DcmP | |
| 9300 | drug/metabolite exporter YedA | |||
| 15315 | replication endonuclease | |||
| 15320 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco56338ORF15320P |
| 15325 | TraR/DksA family transcriptional regulator | |||
| 20475 | HNH endonuclease | |||
| 20480 | R | EcohubtORF19915P (100% identity) | Eco56338ORF20480P | |
| 20485 | AAA domain-containing protein | |||
| 20640 | 5-nucleotidase | |||
| 20645 | R | EcohubtORF20080P (100% identity) | GAAC | Eco56338ORF20645P |
| 20650 | DUF4102 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20480 | HNH endonuclease | |||
| 20485 | R | SflN101McrBP (100% identity) | Eco56338McrBP | |
| 20490 | R | EcohubtMcrCP (100% identity) | Eco56338McrCP | |
| 20495 | 128 aa hypothetical protein | |||