Salmonella enterica subsp. enterica serovar Enteritidis K12SE001 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis K12SE001 RM systems
Ref: Moon,D. and Lim,S.-K. unpublished
REBASE ref # 28982
Complete sequence: 4,680,830 bp
GenBank #: CP043563
REBASE acronym: SenSE001
Org_num: 35557
All begin FV589_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19645 | AAA family ATPase | |||
| 19650 | M | M.SspSAL045ORF19385P (100% identity) | GGYANNNNNNTCG | M.SenSE001ORF19650P |
| 19655 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenSE001ORF19650P |
| 19660 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenSE001ORF19650P |
| 19665 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1790 | cell division protein DamX | |||
| 1795 | M | M.StyTDamP (100% identity) | GATC | M.SenSE001DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 domain-containing protein | |||
| 2280 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSE001II |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 9025 | PerC family transcriptional regulator | |||
| 9030 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenSE001ORF9030P |
| 9035 | RusA family crossover junction | |||
| 13980 | drug/metabolite exporter YedA | |||
| 13985 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenSE001DcmP |
| 13990 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenSE001Dcm |
| 13995 | phosphohydrolase | |||
| 19775 | YebC/PmpR family DNA-binding transcriptional | |||
| 19780 | R | SspSAL045ORF19515P (100% identity) | SenSE001ORF19780P | |
| 19785 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17530 | 33 aa hypothetical protein | |||
| 17535 | R | SspSAL045ORF17295P (100% identity) | CAGAG | SenSE001IP |
| 17540 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SenSE001I |
| 17545 | MFS transporter | |||