Vibrio cholerae RFB05 |
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Putative Vibrio cholerae RFB05 RM systems
Ref: Bina,R.F. unpublished
REBASE ref # 30078
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,162,181 bp | CP043557 |
| chromosome 2: | 1,195,141 bp | CP043558 |
REBASE acronym: VchRFB05
Org_num: 39023
All begin F0315_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1060 | 806 aa hypothetical protein | |||
| 1065 | R | VchMZO2ORF4125P (99% identity) | VchRFB05ORF1095P | |
| 1070 | site-specific DNA-methyltransferase | |||
| 1075 | 94 aa hypothetical protein | |||
| 1080 | elongation factor Ts | |||
| 1085 | 49 aa hypothetical protein | |||
| 1090 | 132 aa hypothetical protein | |||
| 1095 | M | M.VpaK32ORFCP (99% identity) | M.VchRFB05ORF1095P | |
| 1100 | S | S.VpaMVP6ORF14835P (70% identity) | S.VchRFB05ORF1095P | |
| 1105 | 331 aa hypothetical protein | |||
| 9595 | transcription factor | |||
| 9600 | M | M.Vci242301ORFEP (97% identity) | M.VchRFB05ORF9600P | |
| 9605 | S | S.NstHISORF809P (59% identity) | S.VchRFB05ORF9600P | |
| 9610 | DUF262 domain-containing protein | |||
| 9615 | DUF262 domain-containing protein | |||
| 9620 | R | VchVC53ORF9945P (99% identity) | VchRFB05ORF9600P | |
| 9625 | M48 family metallopeptidase | |||
| chromosome 2 | ||||
| 15725 | DUF4113 domain-containing protein | |||
| 15730 | M | M.VfuMT14ORF18165P (97% identity) | M.VchRFB05ORF15730P | |
| 15735 | S | S.ScoM318ORF10920P (61% identity) | S1.VchRFB05ORF15730P | |
| 15740 | DUF1016 domain-containing protein | |||
| 15745 | R | VfuMT14ORF18165P (98% identity) | VchRFB05ORF15730P | |
| 15750 | 145 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1065 | DEAD/DEAH box helicase | |||
| 1070 | M | M.VchMZO2ORF4140P (97% identity) | M.VchRFB05ORF1070P | |
| 1075 | 94 aa hypothetical protein | |||
| 2735 | ABC transporter substrate-binding protein | |||
| 2740 | M | M.VvuGCU01ORF2010P (93% identity) | M.VchRFB05ORF2740P | |
| 2745 | 422 aa hypothetical protein | |||
| 6645 | AAA family ATPase | |||
| 6650 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchRFB05DamP |
| 6655 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1175 | 75 aa hypothetical protein | |||
| 1180 | R | Vsp252189ORF14715P (99% identity) | VchRFB05ORF1180P | |
| 1185 | 55 aa hypothetical protein | |||