Neisseria meningitidis 09-292 |
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Putative Neisseria meningitidis 09-292 RM systems
Ref: Stenmark,B. et al. unpublished
REBASE ref # 21229
Complete sequence: 2,198,497 bp
GenBank #: CP021521
REBASE acronym: Nme292
Org_num: 23067
All begin CCD83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2845 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2850 | M | M.Nme98ORF2765P (100% identity) | M.Nme292ORF2850P | |
| 2855 | cell filamentation protein Fic | |||
| ??? | S | S3.Nme10444ORF1351P (100% identity) | S1.Nme292ORF2850P | |
| 2865 | S | type I restriction endonuclease subunit S | S2.Nme292ORF2850P | |
| 2870 | IS1595 family transposase ISNme3 | |||
| 2875 | S | S3.Nme98ORF2765P (100% identity) | S3.Nme292ORF2850P | |
| 2880 | R | Nme98ORF2765P (100% identity) | Nme292ORF2850P | |
| 2885 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4935 | ABC transporter | |||
| 4940 | M | M.Nme98I (100% identity) | CACNNNNNTAC | M.Nme292I |
| 4945 | S | S.Nme98I (100% identity) | CACNNNNNTAC | S.Nme292I |
| 4950 | R | Nme98IP (100% identity) | CACNNNNNTAC | Nme292IP |
| 4955 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40 | leucine--tRNA ligase | |||
| 45 | M | M1.Nme98ORF45P (100% identity) | GATC | M1.Nme292ORF45P |
| 50 | M | M1.Nme10444ORF1812P (100% identity) | GATC | M2.Nme292ORF45P |
| 55 | 184 aa hypothetical protein | |||
| 2830 | D-glycero-beta-D-manno-heptose-7-phosphate | |||
| 2835 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme292ORF2835P |
| ??? | R | NmeA153ORF1220P (100% identity) | Nme292ORF2835P | |
| 2845 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 3540 | transposase | |||
| 3545 | M | M.Nme98ORF3460P (100% identity) | M.Nme292ORF3545P | |
| 3550 | HNH endonuclease | |||
| 5045 | 3-isopropylmalate dehydratase small subunit | |||
| ??? | M | M.Nme10444ORF967P (100% identity) | GGNNCC | M.Nme292ORFAP |
| 5060 | R | NmeW135ORF659P (21% identity) | Nme292ORFAAP | |
| 5065 | IS1595 family transposase ISNme3 | |||
| 5070 | R | NmeS4ORFHP (97% identity) | Nme292ORFABP | |
| 5075 | 3-isopropylmalate dehydrogenase | |||
| 5270 | ribonucleotide-diphosphate reductase subunit | |||
| 5275 | R | NmeMC58ORF1290P (100% identity) | Nme292ORF5280P | |
| 5280 | M | M.Nme98ORF5200P (100% identity) | M.Nme292ORF5280P | |
| 5285 | ribonucleoside-diphosphate reductase subunit | |||
| 7095 | 243 aa hypothetical protein | |||
| 7100 | RM | Nme98ORF7020AP (100% identity) | Nme292ORF7100AP | |
| 7105 | RM | Nme98ORF7020BP (100% identity) | Nme292ORF7100BP | |
| 7110 | pilS cassette | |||
| 10525 | dTDP-glucose 4,6-dehydratase | |||
| ??? | M | M.NmeST254ORF61P (100% identity) | M1.Nme292ORF10530P | |
| 10535 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M2.Nme292ORF10530P |
| 10540 | RNA-binding transcriptional accessory protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5760 | tRNA pseudouridine(55) synthase TruB | |||
| 5765 | M | M.Nme563ORF5665P (96% identity) | ACACC | M.Nme292ORF5765P |
| 5770 | R | type III restriction endonuclease subunit R | ACACC | Nme292ORF5765AP |
| 5775 | IS30 family transposase | |||
| 5780 | R | type III restriction endonuclease subunit R | ACACC | Nme292ORF5765BP |
| 5785 | alpha-hydroxy-acid oxidizing enzyme | |||