Treponema phagedenis S11.1 |
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Putative Treponema phagedenis S11.1 RM systems
Ref: Kuhnert,P. unpublished
REBASE ref # 30072
Complete sequence: 3,436,741 bp
GenBank #: CP042813
REBASE acronym: TphS111
Org_num: 38983
All begin FUT81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6680 | 142 aa hypothetical protein | |||
| 6685 | M | M.TphV1ORF40163P (100% identity) | M.TphS111ORF6685P | |
| 6690 | uracil permease | |||
| 13845 | MFS transporter | |||
| 13850 | R | TphS23ORF13960P (100% identity) | TphS111ORF13875P | |
| 13855 | S | S2.TphS23ORF13960P (100% identity) | S2.TphS111ORF13875P | |
| 13860 | S | S1.TphS23ORF13960P (99% identity) | S1.TphS111ORF13875P | |
| 13865 | cell filamentation protein Fic | |||
| 13870 | virulence RhuM family protein | |||
| 13875 | M | M.TphT320AORF8850P (100% identity) | M.TphS111ORF13875P | |
| 13880 | 114 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 410 | HAMP domain-containing protein | |||
| 415 | M | M.TphS85ORF13365P (100% identity) | M.TphS111ORF10835P | |
| 420 | 94 aa hypothetical protein | |||
| 625 | 184 aa hypothetical protein | |||
| 630 | M | M.TphV1ORF30139P (100% identity) | M.TphS111ORF630P | |
| 635 | phosphohydrolase | |||
| 1985 | DUF436 domain-containing protein | |||
| 1990 | M | M.TphS23ORF2005P (100% identity) | M.TphS111ORF1990P | |
| 1995 | 63 aa hypothetical protein | |||
| 2135 | 184 aa hypothetical protein | |||
| 2140 | M | M.TphS23ORF9240P (100% identity) | M.TphS111ORF2140P | |
| 2145 | haloacid dehalogenase-like hydrolase | |||
| 2215 | ABC transporter ATP-binding protein | |||
| 2220 | M | M.TphS23ORF2230P (100% identity) | M.TphS111ORF2220P | |
| 2225 | 184 aa hypothetical protein | |||
| 2405 | 61 aa hypothetical protein | |||
| 2410 | M | M.TphS23ORF13395P (100% identity) | M.TphS111ORF13530P | |
| 2415 | 284 aa hypothetical protein | |||
| 2480 | DUF4406 domain-containing protein | |||
| 2485 | M | M.TphS23ORF2495P (97% identity) | M.TphS111ORF2485P | |
| 2490 | oxidoreductase | |||
| 2500 | 167 aa hypothetical protein | |||
| 2505 | M | M.TphS23ORF2515P (100% identity) | M.TphS111ORF2505P | |
| 2510 | 61 aa hypothetical protein | |||
| 2705 | 184 aa hypothetical protein | |||
| 2710 | M | M.TphS23ORF2725P (100% identity) | M.TphS111ORF2710P | |
| 2715 | site-specific integrase | |||
| 3215 | 184 aa hypothetical protein | |||
| 3220 | M | M.TphS23ORF3230P (100% identity) | M.TphS111ORF3220P | |
| 3225 | DUF4325 domain-containing protein | |||
| 3990 | IS256 family transposase | |||
| 3995 | M | M1.TphT320AORF8425P (100% identity) | M.TphS111ORF3995P | |
| 4000 | MBL fold metallo-hydrolase | |||
| 4070 | TrkH family potassium uptake protein | |||
| 4075 | M | M.TphS23ORF4090P (100% identity) | M.TphS111ORF4075P | |
| 4080 | restriction endonuclease | |||
| 6155 | TdeIII family type II restriction endonuclease | |||
| 6160 | M | M.TphV1ORF40108P (100% identity) | M.TphS111ORF6160P | |
| 6165 | ABC transporter ATP-binding protein | |||
| 7305 | oxidoreductase | |||
| 7310 | M | M.TphS23ORF7400P (100% identity) | M.TphS111ORF7310P | |
| 7315 | DUF4406 domain-containing protein | |||
| 7490 | 155 aa hypothetical protein | |||
| 7495 | S | S2.TphS23ORF7595P (100% identity) | S2.TphS111ORF7505P | |
| 7500 | S | S1.TphS23ORF7595P (100% identity) | S1.TphS111ORF7505P | |
| 7505 | RM | TphS23ORF7595P (100% identity) | TphS111ORF7505P | |
| 7510 | ImmA/IrrE family metallo-endopeptidase | |||
| 8115 | VWA domain-containing protein | |||
| 8120 | M | M.TphS85ORF3985P (100% identity) | GATC | M.TphS111ORF8120P |
| 8125 | R | TphS23ORF8205P (100% identity) | GATC | TphS111ORF8120P |
| 8130 | DUF3847 domain-containing protein | |||
| 9145 | dicarboxylate/amino acid:cation symporter | |||
| 9150 | M | M.TphB365ORF620P (94% identity) | M.TphS111ORF9150P | |
| 9155 | 184 aa hypothetical protein | |||
| 9345 | 94 aa hypothetical protein | |||
| 9350 | M | M.TphS23ORF13790P (100% identity) | M.TphS111ORF9350P | |
| 9355 | DNA helicase RecQ | |||
| 10060 | ImmA/IrrE family metallo-endopeptidase | |||
| 10065 | RM | TphS23ORF7595P (98% identity) | TphS111ORF10065P | |
| 10070 | S | S1.TphS23ORF7595P (98% identity) | S1.TphS111ORF10065P | |
| 10075 | S | S2.TphS23ORF10150P (100% identity) | S2.TphS111ORF10065P | |
| 10080 | 121 aa hypothetical protein | |||
| 10295 | 167 aa hypothetical protein | |||
| 10300 | M | M.TphS23ORF10380P (99% identity) | M.TphS111ORF10300P | |
| 10305 | AAA family ATPase | |||
| 11050 | 184 aa hypothetical protein | |||
| 11055 | M | M.TphV1ORF30139P (100% identity) | M.TphS111ORF3635P | |
| 11060 | single-stranded DNA-binding protein | |||
| 11345 | 555 aa hypothetical protein | |||
| 11350 | M | M.TphV1ORF260015P (100% identity) | M.TphS111ORF11350P | |
| 11355 | 172 aa hypothetical protein | |||
| 12880 | 288 aa hypothetical protein | |||
| 12885 | M | M.TphS85ORF14070P (100% identity) | M.TphS111ORF12885P | |
| 12890 | 193 aa hypothetical protein | |||
| 12965 | 288 aa hypothetical protein | |||
| 12970 | M | M.TphS23ORF12835P (100% identity) | M.TphS111ORF12970P | |
| 12975 | 153 aa hypothetical protein | |||
| 13010 | 288 aa hypothetical protein | |||
| 13015 | M | M.TphS85ORF14070P (100% identity) | M.TphS111ORF13015P | |
| 13020 | 192 aa hypothetical protein | |||
| 13085 | DUF2971 domain-containing protein | |||
| 13090 | M | M.TphS23ORF12955P (100% identity) | M.TphS111ORF13090P | |
| 13095 | R | TphS23ORF12955P (100% identity) | TphS111ORF13090P | |
| 13100 | DUF1643 domain-containing protein | |||
| 13175 | sucrose-6-phosphate hydrolase | |||
| 13180 | M | M2.TphV1ORF510001P (100% identity) | M1.TphS111ORF13180P | |
| 13185 | M | M2.TphS23ORF13045P (100% identity) | M2.TphS111ORF13180P | |
| 13190 | R | TphT320AORF9745P (100% identity) | TphS111ORF13180P | |
| 13195 | TIGR02678 family protein | |||
| 14930 | 89 aa hypothetical protein | |||
| 14935 | R | TphS23ORF15025P (100% identity) | TphS111ORF14940P | |
| 14940 | M | M.TphS85ORF11405P (100% identity) | M.TphS111ORF14940P | |
| 14945 | 229 aa hypothetical protein | |||
| 15135 | transposase | |||
| 15140 | M | M.TphS23ORF15225P (100% identity) | M.TphS111ORF15140P | |
| 15145 | 117 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2830 | 75 aa hypothetical protein | |||
| 2835 | M | M.TphV1ORF140026P (96% identity) | M.TphS111ORF2835P | |
| 2840 | R | TphS23ORF2845P (100% identity) | TphS111ORF2835P | |
| 2845 | IclR family transcriptional regulator | |||
| 8325 | DUF4868 domain-containing protein | |||
| 8330 | M | M.TphS85ORF3440P (100% identity) | M.TphS111ORF8330P | |
| 8335 | R | TphS85ORF3440P (100% identity) | TphS111ORF8330P | |
| 8340 | alpha/beta fold hydrolase | |||
| 10685 | IS256 family transposase | |||
| 10690 | R | TphS23ORF10780P (100% identity) | TphS111ORF10695P | |
| 10695 | M | M.TphS23ORF10780P (100% identity) | M.TphS111ORF10695P | |
| 10700 | helix-turn-helix transcriptional regulator | |||