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Putative Treponema phagedenis B36.5 RM systems
Ref: Kuhnert,P. unpublished
REBASE ref # 30072
Complete sequence: 3,708,782 bp
GenBank #: CP042817
REBASE acronym: TphB365
Org_num: 38981
All begin FUT82_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
8425 | 142 aa hypothetical protein | |||
8430 | M | M.TphV1ORF40163P (100% identity) | M.TphB365ORF8430P | |
8435 | uracil permease | |||
15310 | MFS transporter | |||
15315 | R | TphS85ORF13530P (100% identity) | TphB365ORF15335P | |
15320 | S | S2.TphS85ORF13530P (98% identity) | S2.TphB365ORF15335P | |
15325 | S | S.TphRORF8890P (64% identity) | S1.TphB365ORF15335P | |
15330 | 110 aa hypothetical protein | |||
15335 | M | M.TphT320AORF8850P (100% identity) | M.TphB365ORF15335P | |
15340 | 114 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
415 | HAMP domain-containing protein | |||
420 | M | M.TphS85ORF13365P (100% identity) | M.TphB365ORF420P | |
425 | 94 aa hypothetical protein | |||
615 | 184 aa hypothetical protein | |||
620 | M | M.TphKS1AORF16595P (98% identity) | M.TphB365ORF620P | |
625 | haloacid dehalogenase-like hydrolase | |||
690 | ABC transporter ATP-binding protein | |||
695 | M | M.TphS23ORF9240P (100% identity) | M.TphB365ORF695P | |
700 | 184 aa hypothetical protein | |||
1730 | site-specific integrase | |||
1735 | M | M.TphB365ORF2250P (100% identity) | M.TphB365ORF1735P | |
1740 | 184 aa hypothetical protein | |||
2245 | site-specific integrase | |||
2250 | M | M.TphB365ORF1735P (100% identity) | M.TphB365ORF2250P | |
2255 | 184 aa hypothetical protein | |||
2455 | 61 aa hypothetical protein | |||
2460 | M | M.TphS23ORF2515P (100% identity) | M.TphB365ORF2460P | |
2465 | 167 aa hypothetical protein | |||
2475 | oxidoreductase | |||
2480 | M | M.TphKS1AORF5685P (94% identity) | M.TphB365ORF2480P | |
2485 | DUF4406 domain-containing protein | |||
2555 | 284 aa hypothetical protein | |||
2560 | M | M.TphS23ORF13395P (100% identity) | M.TphB365ORF14995P | |
2565 | 61 aa hypothetical protein | |||
2745 | 184 aa hypothetical protein | |||
2750 | M | M.TphS23ORF3230P (100% identity) | M.TphB365ORF2750P | |
2755 | DUF4325 domain-containing protein | |||
3175 | 94 aa hypothetical protein | |||
3180 | M | M.TphV1ORF30139P (100% identity) | M.TphB365ORF3180P | |
3185 | 184 aa hypothetical protein | |||
3325 | 63 aa hypothetical protein | |||
3330 | M | M.TphS23ORF2005P (100% identity) | M.TphB365ORF3330P | |
3335 | DUF436 domain-containing protein | |||
4665 | ImmA/IrrE family metallo-endopeptidase | |||
4670 | RM | TphS85ORF115P (99% identity) | TphB365ORF4670P | |
4675 | S | S1.TphKS1AORF5475P (99% identity) | S1.TphB365ORF4670P | |
4680 | S | S.TphS85ORF115P (31% identity) | S2.TphB365ORF4670P | |
4685 | 121 aa hypothetical protein | |||
4885 | DUF4406 domain-containing protein | |||
4890 | M | M.TphB365ORF8000P (98% identity) | M.TphB365ORF4890P | |
4895 | oxidoreductase | |||
5020 | phosphohydrolase | |||
5025 | M | M.TphV1ORF30139P (100% identity) | M.TphB365ORF5025P | |
5030 | 184 aa hypothetical protein | |||
5240 | 94 aa hypothetical protein | |||
5245 | M | M.TphS23ORF3870P (100% identity) | M.TphB365ORF5245P | |
5250 | VOC family protein | |||
5395 | IS256 family transposase | |||
5400 | M | M1.TphT320AORF8425P (100% identity) | M.TphB365ORF5400P | |
5405 | MBL fold metallo-hydrolase | |||
5480 | 144 aa hypothetical protein | |||
5485 | M | M.TphV1ORF30070P (95% identity) | M.TphB365ORF5485P | |
5490 | restriction endonuclease | |||
7565 | TdeIII family type II restriction endonuclease | |||
7570 | M | M.TphV1ORF40108P (100% identity) | M.TphB365ORF7570P | |
7575 | ABC transporter ATP-binding protein | |||
7995 | oxidoreductase | |||
8000 | M | M.TphS85ORF5505P (98% identity) | M.TphB365ORF8000P | |
8005 | DUF4406 domain-containing protein | |||
9090 | oxidoreductase | |||
9095 | M | M.TphS23ORF7400P (100% identity) | M.TphB365ORF9095P | |
9100 | DUF4406 domain-containing protein | |||
9275 | 155 aa hypothetical protein | |||
9280 | S | S2.TphS23ORF7595P (100% identity) | S2.TphB365ORF9290P | |
9285 | S | S1.TphS23ORF7595P (98% identity) | S1.TphB365ORF9290P | |
9290 | RM | TphS23ORF7595P (100% identity) | TphB365ORF9290P | |
9295 | ImmA/IrrE family metallo-endopeptidase | |||
9890 | VWA domain-containing protein | |||
9895 | M | M.TphS85ORF3985P (98% identity) | GATC | M.TphB365ORF9895P |
9900 | R | TphT320AORF5230P (100% identity) | GATC | TphB365ORF9895P |
9905 | DUF3847 domain-containing protein | |||
10930 | dicarboxylate/amino acid:cation symporter | |||
10935 | M | M.TphS85ORF8335P (97% identity) | M.TphB365ORF10935P | |
10940 | 184 aa hypothetical protein | |||
11140 | 94 aa hypothetical protein | |||
11145 | M | M1.TphT320AORF8425P (99% identity) | M.TphB365ORF11145P | |
11150 | DNA helicase RecQ | |||
11840 | ImmA/IrrE family metallo-endopeptidase | |||
11845 | RM | TphKS1AORF5475P (95% identity) | TphB365ORF11845P | |
11850 | S | S.TphRORF2470P (50% identity) | S1.TphB365ORF11845P | |
11855 | S | S2.TphKS1AORF5475P (96% identity) | S2.TphB365ORF11845P | |
11860 | 121 aa hypothetical protein | |||
12085 | 167 aa hypothetical protein | |||
12090 | M | M.TphS23ORF10380P (98% identity) | M.TphB365ORF12090P | |
12095 | AAA family ATPase | |||
12925 | 555 aa hypothetical protein | |||
12930 | M | M.TphV1ORF260015P (100% identity) | M.TphB365ORF12930P | |
12935 | 172 aa hypothetical protein | |||
14435 | 288 aa hypothetical protein | |||
14440 | M | M.TphS85ORF14070P (100% identity) | M.TphB365ORF14440P | |
14445 | 193 aa hypothetical protein | |||
14520 | 288 aa hypothetical protein | |||
14525 | M | M.TphS23ORF12835P (100% identity) | M.TphB365ORF14525P | |
14530 | 153 aa hypothetical protein | |||
14565 | 118 aa hypothetical protein | |||
14570 | M | M.TphS85ORF14145P (100% identity) | M.TphB365ORF14570P | |
14575 | DUF262 domain-containing protein | |||
14570 | restriction endonuclease subunit M | |||
14575 | R | TphB431ORF2995P (96% identity) | TphB365ORF14575P | |
14580 | 135 aa hypothetical protein | |||
14640 | sucrose-6-phosphate hydrolase | |||
14645 | M | M2.TphV1ORF510001P (100% identity) | M1.TphB365ORF14645P | |
14650 | M | M2.TphS23ORF13045P (100% identity) | M2.TphB365ORF14645P | |
14655 | R | TphT320AORF9745P (100% identity) | TphB365ORF14645P | |
14660 | TIGR02678 family protein | |||
14785 | methyl-accepting chemotaxis protein | |||
14790 | M | M.TphV1ORF30139P (99% identity) | M.TphB365ORF14790P | |
14795 | 184 aa hypothetical protein | |||
16365 | 89 aa hypothetical protein | |||
16370 | R | TphS23ORF15025P (100% identity) | TphB365ORF16375P | |
16375 | M | M.TphS85ORF11405P (100% identity) | M.TphB365ORF16375P | |
16380 | 239 aa hypothetical protein | |||
16570 | transposase | |||
16575 | M | M.TphS23ORF15225P (100% identity) | M.TphB365ORF16575P | |
16580 | 117 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1610 | IclR family transcriptional regulator | |||
1615 | R | TphB365ORF1080P (100% identity) | TphB365ORF1620P | |
1620 | M | M.TphV1ORF140026P (96% identity) | M.TphB365ORF1620P | |
1625 | 133 aa hypothetical protein | |||
2125 | IclR family transcriptional regulator | |||
2130 | R | TphB365ORF1620P (100% identity) | TphB365ORF1080P | |
2135 | M | M.TphV1ORF140026P (96% identity) | M.TphB365ORF1080P | |
2140 | 133 aa hypothetical protein | |||
10100 | DUF4868 domain-containing protein | |||
10105 | M | M.TphS85ORF3440P (100% identity) | M.TphB365ORF10105P | |
10110 | R | TphS85ORF3440P (100% identity) | TphB365ORF10105P | |
10115 | alpha/beta fold hydrolase | |||
12485 | IS256 family transposase | |||
12490 | R | TphS23ORF10780P (100% identity) | TphB365ORF12495P | |
12495 | M | M.TphS23ORF10780P (100% identity) | M.TphB365ORF12495P | |
12500 | helix-turn-helix transcriptional regulator |