Salmonella enterica subsp. enterica serovar Heidelberg SL-312 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg SL-312 RM systems
Ref: Laskey,A. et al. unpublished
REBASE ref # 28958
| Sequence length: | GenBank #: | |
| Chromosome: | 4,751,368 bp | CP043214 |
| plasmid pET8.1-IncAC2: | 165,649 bp | CP043215 |
REBASE acronym: SenSL312
Org_num: 35705
All begin FYA03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19960 | restriction endonuclease | |||
| 19965 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenSL312ORF19970P |
| 19970 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenSL312ORF19970P |
| 19975 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenSL312ORF19970P |
| 19980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.SenSL312DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 domain-containing protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSL312ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9065 | phosphohydrolase | |||
| 9070 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenSL312DcmP |
| 9075 | V | V.StyTDcmP (100% identity) | V.SenSL312DcmP | |
| 9080 | drug/metabolite exporter YedA | |||
| 14255 | YqaJ viral recombinase family protein | |||
| 14260 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenSL312ORF14260P |
| 14265 | DUF4060 family protein | |||
| 20130 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenSL312ORF20130P |
| 20135 | DEAD/DEAH box helicase | |||
| plasmid pET8.1-IncAC2 | ||||
| 23880 | 100 aa hypothetical protein | |||
| 23885 | M | M.YrupYR1ORFCP (100% identity) | M.SenSL312ORF23885P | |
| 23890 | 158 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17375 | 33 aa hypothetical protein | |||
| 17380 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenSL312ORF17385P |
| 17385 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenSL312ORF17385P |
| 17390 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19955 | BrnT family toxin | |||
| 19960 | R | StyUK1MrrP (100% identity) | SenSL312MrrP | |
| 19965 | type I restriction-modification system | |||