Histophilus somni UOC-KLM-ATR-01 |
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Putative Histophilus somni UOC-KLM-ATR-01 RM systems
Ref: Mostafa Nazari,M. and Liljebjelke,K. unpublished
REBASE ref # 29731
Complete sequence: 2,110,695 bp
GenBank #: CP042983
REBASE acronym: HsoATR01
Org_num: 37936
All begin FWK43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4685 | DMT family transporter | |||
| 4690 | M | M.HsoMASF01ORF5515P (100% identity) | M.HsoATR01ORF4690P | |
| 4695 | Fic family protein | |||
| 4700 | S | S.HsoATR08ORF4720P (100% identity) | S.HsoATR01ORF4690P | |
| 4705 | 174 aa hypothetical protein | |||
| 4710 | R | HsoMASF01ORF5515P (100% identity) | HsoATR01ORF4690P | |
| 4715 | exodeoxyribonuclease I | |||
| 6085 | restriction endonuclease subunit S | |||
| 6090 | R | HsoMASF01ORF4110P (99% identity) | GATTNNNNNGTT | HsoATR01ORF6110P |
| 6095 | abortive phage resistance protein | |||
| 6100 | S | S.HsoATR07ORF6020P (95% identity) | GATTNNNNNGTT | S.HsoATR01ORF6110P |
| 6105 | cell filamentation protein Fic | |||
| 6110 | M | M.HsoATR013ORF6125P (100% identity) | GATTNNNNNGTT | M.HsoATR01ORF6110P |
| 6115 | 180 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 850 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||
| 855 | S | S2.HsoMASF01ORF9350P (100% identity) | S2.HsoATR01ORF865P | |
| 860 | S | S.HsoF08ORF9375P (38% identity) | S1.HsoATR01ORF865P | |
| 865 | RM | HsoMASF01ORF9350P (100% identity) | HsoATR01ORF865P | |
| 870 | helix-turn-helix domain-containing protein | |||
| 1710 | HrgA protein | |||
| 1715 | RM | HsoMASF01ORF8480AP (99% identity) | HsoATR01ORF1715AP | |
| 1720 | RM | HsoATR013ORF1720BP (100% identity) | HsoATR01ORF1715BP | |
| 1725 | ionic transporter y4hA | |||
| 2170 | site-specific integrase | |||
| 2175 | C | C.HsoMASF01ORF8025P (100% identity) | C.HsoATR01ORF2180P | |
| 2180 | M | M.HsoMASF01ORF8025P (29% identity) | M1.HsoATR01ORF2180P | |
| 2185 | M | M.HsoMASF01ORF8025P (68% identity) | M2.HsoATR01ORF2180P | |
| 2190 | R | HsoMASF01ORF8025P (100% identity) | HsoATR01ORF2180P | |
| 2195 | V | V.HsoMASF01ORF8025P (100% identity) | V.HsoATR01ORF2180P | |
| 2200 | DUF4868 domain-containing protein | |||
| 2540 | TdeIII family type II restriction endonuclease | |||
| 2545 | M | M.HsoMASF01ORF7665P (100% identity) | M.HsoATR01ORF2545P | |
| 2550 | valine--tRNA ligase | |||
| 7765 | DUF1367 family protein | |||
| 7770 | M | M.HsoMASF01ORF2040P (98% identity) | M.HsoATR01ORF7770P | |
| 7775 | replication protein P | |||
| 7905 | polymer-forming cytoskeletal protein | |||
| 7910 | M | M.HsoMASF01ORF1910P (100% identity) | M.HsoATR01ORF7910P | |
| 7915 | 264 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3475 | UTP--glucose-1-phosphate uridylyltransferase | |||
| 3480 | M | M.HsoMASF01ORF6725P (100% identity) | M.HsoATR01ORF3480P | |
| 3485 | 3-dehydroquinate synthase | |||