Histophilus somni UOC_EPH_KLM_ASF_01 |
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Putative Histophilus somni UOC_EPH_KLM_ASF_01 RM systems
Ref: Mostafa Nazari,M. and Liljebjelke,K. unpublished
REBASE ref # 29731
Complete sequence: 2,183,478 bp
GenBank #: CP042863
REBASE acronym: HsoMASF01
Org_num: 37939
All begin FVA84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4105 | CTP synthetase | |||
| 4110 | S | S.Hso71ORF4100P (88% identity) | S1.HsoMASF01ORF4110P | |
| 4115 | site-specific integrase | |||
| 4120 | S | S2.HsoF04ORF4115P (99% identity) | S2.HsoMASF01ORF4110P | |
| 4125 | abortive phage resistance protein | |||
| 4130 | R | HsoKLM014ORF4145P (100% identity) | HsoMASF01ORF4110P | |
| 4135 | restriction endonuclease subunit S | |||
| 5490 | exodeoxyribonuclease I | |||
| 5495 | R | HsoKLM014ORF5540P (100% identity) | HsoMASF01ORF5515P | |
| 5500 | 174 aa hypothetical protein | |||
| 5505 | S | S.HsoF08ORF5500P (100% identity) | S.HsoMASF01ORF5515P | |
| 5510 | Fic family protein | |||
| 5515 | M | M.HsoKLM014ORF5540P (100% identity) | M.HsoMASF01ORF5515P | |
| 5520 | DMT family transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | 264 aa hypothetical protein | |||
| 1910 | M | M.HsoKLM014ORF1915P (100% identity) | M.HsoMASF01ORF1910P | |
| 1915 | polymer-forming cytoskeletal protein | |||
| 2035 | replication protein P | |||
| 2040 | M | M.HsoKLM014ORF2045P (91% identity) | M.HsoMASF01ORF2040P | |
| 2045 | DUF1367 family protein | |||
| 7660 | valine--tRNA ligase | |||
| 7665 | M | M.HsoATR01ORF2545P (100% identity) | M.HsoMASF01ORF7665P | |
| 7670 | TdeIII family type II restriction endonuclease | |||
| 8010 | DUF4868 domain-containing protein | |||
| 8015 | V | V.HsoKLM014ORF8080P (100% identity) | V.HsoMASF01ORF8025P | |
| 8020 | R | HsoATR01ORF2180P (100% identity) | HsoMASF01ORF8025P | |
| 8025 | M | M.HsoKLM014ORF8080P (95% identity) | M.HsoMASF01ORF8025P | |
| 8030 | C | C.HsoKLM014ORF8080P (100% identity) | C.HsoMASF01ORF8025P | |
| 8035 | site-specific integrase | |||
| 8475 | ionic transporter y4hA | |||
| 8480 | RM | HsoKLM014ORF8535BP (100% identity) | HsoMASF01ORF8480BP | |
| 8485 | RM | HsoKLM014ORF8535AP (100% identity) | HsoMASF01ORF8480AP | |
| 8490 | HrgA protein | |||
| 9345 | helix-turn-helix domain-containing protein | |||
| 9350 | RM | HsoF03ORF9370P (100% identity) | HsoMASF01ORF9350P | |
| ??? | S | S1.HsoF03ORF9370P (95% identity) | S1.HsoMASF01ORF9350P | |
| 9355 | S | S2.HsoATR01ORF865P (100% identity) | S2.HsoMASF01ORF9350P | |
| 9360 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6720 | 3-dehydroquinate synthase | |||
| 6725 | M | M.HsoKLM014ORF6760P (100% identity) | M.HsoMASF01ORF6725P | |
| 6730 | UTP--glucose-1-phosphate uridylyltransferase | |||