Histophilus somni UOC_EPH_KLM_ASF_03 |
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Putative Histophilus somni UOC_EPH_KLM_ASF_03 RM systems
Ref: Mostafa Nazari,M. and Liljebjelke,K. unpublished
REBASE ref # 29731
Complete sequence: 2,183,450 bp
GenBank #: CP042847
REBASE acronym: HsoF03
Org_num: 37829
All begin FVA85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | CTP synthetase | |||
| 4120 | S | S1.HsoATR03ORF4120P (100% identity) | S1.HsoF03ORF4120P | |
| 4125 | site-specific integrase | |||
| 4130 | S | S1.HsoKLM014ORF4145P (100% identity) | S2.HsoF03ORF4120P | |
| 4135 | abortive phage resistance protein | |||
| 4140 | R | HsoMASF01ORF4110P (100% identity) | HsoF03ORF4120P | |
| 4145 | restriction endonuclease subunit S | |||
| 5500 | exodeoxyribonuclease I | |||
| 5505 | R | HsoMASF01ORF5515P (100% identity) | HsoF03ORF5525P | |
| 5510 | 174 aa hypothetical protein | |||
| 5515 | S | S.HsoATR03ORF5520P (100% identity) | S.HsoF03ORF5525P | |
| 5520 | Fic family protein | |||
| 5525 | M | M.HsoMASF01ORF5515P (100% identity) | M.HsoF03ORF5525P | |
| 5530 | DMT family transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | 264 aa hypothetical protein | |||
| 1910 | M | M.HsoMASF01ORF1910P (100% identity) | M.HsoF03ORF1910P | |
| 1915 | polymer-forming cytoskeletal protein | |||
| 2035 | replication protein P | |||
| 2040 | M | M.HsoATR03ORF2035P (100% identity) | M.HsoF03ORF2040P | |
| 2045 | DUF1367 family protein | |||
| 7680 | valine--tRNA ligase | |||
| 7685 | M | M.HsoATR03ORF7675P (100% identity) | M.HsoF03ORF7685P | |
| 7690 | TdeIII family type II restriction endonuclease | |||
| 8030 | DUF4868 domain-containing protein | |||
| 8035 | V | V.HsoMASF01ORF8025P (100% identity) | V.HsoF03ORF8045P | |
| 8040 | R | HsoATR03ORF8035P (100% identity) | HsoF03ORF8045P | |
| 8045 | M | M.HsoKLM014ORF8080P (100% identity) | M.HsoF03ORF8045P | |
| 8050 | C | C.HsoMASF01ORF8025P (100% identity) | C.HsoF03ORF8045P | |
| 8055 | site-specific integrase | |||
| 8495 | ionic transporter y4hA | |||
| 8500 | RM | HsoMASF01ORF8480BP (100% identity) | HsoF03ORF8500BP | |
| 8505 | RM | HsoMASF01ORF8480AP (100% identity) | HsoF03ORF8500AP | |
| 8510 | HrgA protein | |||
| 9365 | transcriptional regulator | |||
| 9370 | RM | HsoMASF01ORF9350P (100% identity) | HsoF03ORF9370P | |
| 9375 | S | S1.HsoATR03ORF9365P (100% identity) | S1.HsoF03ORF9370P | |
| 9380 | S | S2.HsoATR03ORF9365P (100% identity) | S2.HsoF03ORF9370P | |
| 9385 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6735 | 3-dehydroquinate synthase | |||
| 6740 | M | M.HsoMASF01ORF6725P (100% identity) | M.HsoF03ORF6740P | |
| 6745 | UTP--glucose-1-phosphate uridylyltransferase | |||