Escherichia coli NCYU-24-74 |
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Putative Escherichia coli NCYU-24-74 RM systems
Ref: Hsu,C.-Y. et al. unpublished
REBASE ref # 29322
| Sequence length: | GenBank #: | |
| Chromosome: | 4,717,320 bp | CP042638 |
| plasmid pNCYU-24-74-1: | 278,111 bp | CP042639 |
| plasmid pNCYU-24-74-2: | 99,667 bp | CP042640 |
| plasmid pNCYU-24-74-3: | 95,014 bp | CP042641 |
| plasmid pNCYU-24-74-4_MCR3: | 77,023 bp | CP042642 |
REBASE acronym: Eco2474
Org_num: 36750
All begin FTV91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21115 | chromosome partitioning protein ParB | |||
| 21120 | M | M.Ror24150ORF17255P (99% identity) | M.Eco2474ORF21120P | |
| 21125 | S | S.KpnS1313ORF16435P (100% identity) | S.Eco2474ORF21120P | |
| 21130 | R | Ecos41ORF13465P (99% identity) | Eco2474ORF21120P | |
| 21135 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 545 | DNA-binding transcriptional regulator Fis | |||
| 550 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.Eco2474ORF550P |
| 555 | DUF2556 domain-containing protein | |||
| 1120 | ribulose-phosphate 3-epimerase | |||
| 1125 | M | M.Eco2673DamP (96% identity) | M.Eco2474DamP | |
| 1130 | cell division protein DamX | |||
| 4130 | 68 aa hypothetical protein | |||
| 4135 | M | M.EcoS082ORF30P (100% identity) | M.Eco2474ORF4135P | |
| 4140 | 309 aa hypothetical protein | |||
| 17170 | drug/metabolite exporter YedA | |||
| 17175 | V | V.SsoSE61DcmP (99% identity) | V.Eco2474DcmP | |
| 17180 | M | M.Sbo35964DcmP (98% identity) | M.Eco2474DcmP | |
| 17185 | phosphohydrolase | |||
| 20470 | ribosome-associated translation inhibitor RaiA | |||
| 20475 | M | M.SenYU39ORF1896P (100% identity) | M.Eco2474ORF20475P | |
| 20480 | Com family DNA-binding transcriptional | |||
| 21030 | replication endonuclease | |||
| 21035 | M | M.Eho2ORF16025P (98% identity) | M.Eco2474ORF21035P | |
| 21040 | 65 aa hypothetical protein | |||
| plasmid pNCYU-24-74-1 | ||||
| 24055 | 0 aa hypothetical protein | |||
| 24060 | M | M.Ecoppa2ORF24390P (100% identity) | M.Eco2474ORF24060P | |
| 24065 | 108 aa hypothetical protein | |||
| 24655 | nuclease | |||
| 24660 | M | M.Eco2673ORF25540P (99% identity) | M.Eco2474ORF24660P | |
| 24665 | DUF1173 domain-containing protein | |||
| plasmid pNCYU-24-74-2 | ||||
| 25995 | 0 aa hypothetical protein | |||
| 26000 | M | M.UbapRSB107ORFAP (93% identity) | M.Eco2474ORF26000P | |
| 26005 | 54 aa hypothetical protein | |||
| plasmid pNCYU-24-74-3 | ||||
| 26190 | recombination-associated protein RdgC | |||
| 26195 | M | M.EcoZYB62ORF24960P (99% identity) | M.Eco2474ORF26195P | |
| 26210 | 61 aa hypothetical protein | |||
| plasmid pNCYU-24-74-4_MCR3 | ||||
| 26875 | 103 aa hypothetical protein | |||
| 26880 | M | M.Esp9308ORFHP (92% identity) | M.Eco2474ORF26880P | |
| 26885 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18440 | DinI family protein | |||
| 18445 | R | Ecochi7122GmrSDP (100% identity) | Eco2474GmrSDP | |
| 18450 | 41 aa hypothetical protein | |||