Mannheimia haemolytica 38599 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia haemolytica 38599 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,646,006 bp
GenBank #: CP017491
REBASE acronym: Mha38599
Org_num: 37924
All begin BG598_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | methionine synthase | |||
| 3225 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha38599III |
| 3230 | S | S1.MhaGHORF8210P (100% identity) | CAACNNNNGT | S1.Mha38599III |
| 3235 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha38599III | |
| 3240 | 211 aa hypothetical protein | |||
| 8725 | 125 aa hypothetical protein | |||
| ??? | M | M.Mhas183ORF4955P (100% identity) | GACNNNNNTTC | M.Mha38599II |
| 8735 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha38599II |
| 8740 | R | Mhas183ORF4955P (100% identity) | GACNNNNNTTC | Mha38599IIP |
| 8745 | bifunctional glutamine synthetase | |||
| 11520 | phosphatidylserine decarboxylase | |||
| 11525 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha38599IP |
| 11530 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha38599I |
| 11535 | transcriptional regulator | |||
| 11540 | S | S1.Mha33041IP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha38599I |
| 11545 | integrase | |||
| 11550 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha38599IP |
| 11555 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1320 | helicase IV | |||
| 1325 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha38599IV |
| 1330 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha38599IV |
| 1335 | 188 aa hypothetical protein | |||
| 3100 | 234 aa hypothetical protein | |||
| 3105 | M | M.Pba12565ORF10370P (100% identity) | M.Mha38599ORF3105P | |
| 3110 | S6 family igA-specific metalloendopeptidase | |||
| 4750 | 79 aa hypothetical protein | |||
| 4755 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha38599V |
| 4760 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha38599VP |
| 4765 | protein-transmembrane prediction | |||
| 7810 | 168 aa hypothetical protein | |||
| 7815 | M | M.Pba12565ORF7080P (100% identity) | M.Mha38599ORF7815P | |
| 7820 | DNA helicase | |||
| 8540 | 342 aa hypothetical protein | |||
| 8545 | M | M.Pba12565ORF4970P (100% identity) | M.Mha38599ORF8545P | |
| 8550 | replication protein | |||
| 8670 | 69 aa hypothetical protein | |||
| 8675 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha38599ORF8675P | |
| 8680 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha38599ORF8675P | |
| 8685 | 91 aa hypothetical protein | |||
| 9130 | 348 aa hypothetical protein | |||
| 9135 | M | M.Pba12565ORF4290P (100% identity) | M.Mha38599ORF9135P | |
| 9140 | IS481 family transposase | |||
| 9860 | sodium-dependent transporter | |||
| 9865 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha38599ORF9865P |
| 9870 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6650 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha38599ORF6665P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha38599ORF6665P | |
| 6675 | trimethylamine N-oxide reductase I catalytic | |||
| 8205 | DNA gyrase subunit B | |||
| 8210 | R | Mha33041ORF8215P (100% identity) | GTTAAT | Mha38599ORF8215P |
| 8215 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha38599ORF8215P |
| 8220 | methyltransferase | |||