Mannheimia haemolytica 33041 |
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Putative Mannheimia haemolytica 33041 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,645,998 bp
GenBank #: CP017501
REBASE acronym: Mha33041
Org_num: 37914
All begin BG597_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3215 | methionine synthase | |||
| 3220 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha33041III |
| 3225 | type III restriction endonuclease subunit M | |||
| 3230 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha33041III | |
| 3235 | 211 aa hypothetical protein | |||
| 3220 | type I restriction endonuclease subunit M | |||
| 3225 | S | S.Pba12565ORF10250P (99% identity) | CAACNNNNNTC | S1.Mha33041ORF3220P |
| 3230 | restriction endonuclease subunit S | |||
| 8725 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha9ORFIP (100% identity) | GACNNNNNTTC | M.Mha33041II |
| 8740 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha33041II |
| 8745 | R | Mhas183ORF4955P (100% identity) | GACNNNNNTTC | Mha33041IIP |
| 8750 | bifunctional glutamine synthetase | |||
| 11530 | phosphatidylserine decarboxylase | |||
| 11535 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha33041IP |
| 11540 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha33041I |
| 11545 | transcriptional regulator | |||
| 11550 | S | S1.Mha38599I (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha33041IP |
| 11555 | integrase | |||
| 11555 | integrase | |||
| 11560 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha33041ORF11540P |
| 11565 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha33041IV |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha33041IV |
| 1330 | 188 aa hypothetical protein | |||
| 3095 | 234 aa hypothetical protein | |||
| 3100 | M | M.Pba12565ORF10370P (100% identity) | M.Mha33041ORF3100P | |
| 3105 | S6 family igA-specific metalloendopeptidase | |||
| 4750 | 79 aa hypothetical protein | |||
| 4755 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha33041V |
| 4760 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha33041VP |
| 4765 | protein-transmembrane prediction | |||
| 7810 | 168 aa hypothetical protein | |||
| 7815 | M | M.Pba12565ORF7080P (100% identity) | M.Mha33041ORF7815P | |
| 7820 | DNA helicase | |||
| 8540 | 342 aa hypothetical protein | |||
| 8545 | M | M.Pba12565ORF4970P (100% identity) | M.Mha33041ORF8545P | |
| 8550 | replication protein | |||
| 8670 | 69 aa hypothetical protein | |||
| 8675 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha33041ORF8675P | |
| 8680 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha33041ORF8675P | |
| 8685 | 91 aa hypothetical protein | |||
| 9140 | 348 aa hypothetical protein | |||
| 9145 | M | M.Pba12565ORF4290P (100% identity) | M.Mha33041ORF9145P | |
| 9150 | IS481 family transposase | |||
| 9870 | sodium-dependent transporter | |||
| 9875 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha33041ORF9875P |
| 9880 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6650 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha33041ORF6665P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha33041ORF6665P | |
| 6675 | trimethylamine N-oxide reductase I catalytic | |||
| 8205 | DNA gyrase subunit B | |||
| 8210 | R | Mha38599ORF8215P (100% identity) | GTTAAT | Mha33041ORF8215P |
| 8215 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha33041ORF8215P |
| 8220 | adenine methyltransferase | |||