Mannheimia haemolytica 28488 |
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Putative Mannheimia haemolytica 28488 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,727,499 bp
GenBank #: CP017506
REBASE acronym: Mha28488
Org_num: 37909
All begin BG601_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | methionine synthase | |||
| 3225 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha28488V |
| 3230 | type III restriction endonuclease subunit M | |||
| 3235 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha28488V | |
| 3240 | 211 aa hypothetical protein | |||
| 3225 | type I restriction endonuclease subunit M | |||
| 3230 | S | S1.Mhas183ORF10615P (100% identity) | CAACNNNNNTC | S1.Mha28488ORF3225P |
| 3235 | restriction endonuclease subunit S | |||
| 9020 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha32619ORF9035P (100% identity) | GACNNNNNTTC | M.Mha28488III |
| 9040 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha28488III |
| 9045 | R | Mhas183ORF4955P (100% identity) | GACNNNNNTTC | Mha28488IIIP |
| 9050 | bifunctional glutamine synthetase | |||
| 12055 | phosphatidylserine decarboxylase | |||
| 12060 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha28488IP |
| 12065 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha28488I |
| 12070 | transcriptional regulator | |||
| 12075 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha28488I |
| 12080 | integrase | |||
| 12085 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha28488IP |
| 12090 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mha32619III (100% identity) | CTGAAG | Mha28488II |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha28488II |
| 1330 | 188 aa hypothetical protein | |||
| 3100 | adhesin | |||
| 3105 | M | M.Pba12565ORF10370P (100% identity) | M.Mha28488ORF3105P | |
| 3110 | S6 family igA-specific metalloendopeptidase | |||
| 4755 | 79 aa hypothetical protein | |||
| 4760 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha28488IV |
| 4765 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha28488IVP |
| 4770 | protein-transmembrane prediction | |||
| 8105 | 168 aa hypothetical protein | |||
| 8110 | M | M.Pba12565ORF7080P (100% identity) | M.Mha28488ORF8110P | |
| 8115 | DNA helicase | |||
| 8835 | 342 aa hypothetical protein | |||
| 8840 | M | M.Pba12565ORF4970P (100% identity) | M.Mha28488ORF8840P | |
| 8845 | replication protein | |||
| 8965 | 69 aa hypothetical protein | |||
| 8970 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha28488ORF8970P | |
| 8975 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha28488ORF8970P | |
| 8980 | 91 aa hypothetical protein | |||
| 9440 | 348 aa hypothetical protein | |||
| 9445 | M | M.Pba12565ORF4290P (100% identity) | M.Mha28488ORF9445P | |
| 9450 | IS481 family transposase | |||
| 10395 | sodium-dependent transporter | |||
| 10400 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha28488ORF10400P |
| 10405 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6950 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha28488ORF6965P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha28488ORF6965P | |
| 6975 | DNA methylase N-4/N-6 | |||
| 8500 | DNA gyrase subunit B | |||
| 8505 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha28488ORF8510P |
| 8510 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha28488ORF8510P |
| 8515 | 4-hydroxybenzoate polyprenyltransferase | |||