Mannheimia haemolytica 1563 |
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Putative Mannheimia haemolytica 1563 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,683,719 bp
GenBank #: CP017527
REBASE acronym: Mha1563
Org_num: 37888
All begin BG590_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3215 | methionine synthase | |||
| 3220 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1563II |
| 3225 | type III restriction endonuclease subunit M | |||
| 3230 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1563II | |
| 3235 | 211 aa hypothetical protein | |||
| 3220 | type I restriction endonuclease subunit M | |||
| 3225 | S | S1.Mhas183ORF10615P (100% identity) | CAACNNNNNTC | S1.Mha1563ORF3220P |
| 3230 | restriction endonuclease subunit S | |||
| 8755 | bifunctional glutamine synthetase | |||
| 8760 | R | Mhas183ORF4955P (100% identity) | Mha1563ORF8770P | |
| 8765 | S | S.PhaAI (100% identity) | S.Mha1563ORF8770P | |
| ??? | M | M.MhaH23ORF2958P (100% identity) | M.Mha1563ORF8770P | |
| 8775 | methyltransferase | |||
| 11770 | phosphatidylserine decarboxylase | |||
| 11775 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha1563IP |
| 11780 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha1563I |
| 11785 | transcriptional regulator | |||
| 11790 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha1563IP |
| 11795 | integrase | |||
| 11795 | integrase | |||
| 11800 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha1563ORF11780P |
| 11805 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1563III |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1563III |
| 1330 | 188 aa hypothetical protein | |||
| 3095 | adhesin | |||
| 3100 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1563ORF3100P | |
| 3105 | S6 family igA-specific metalloendopeptidase | |||
| 4745 | 79 aa hypothetical protein | |||
| 4750 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1563IV |
| 4755 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1563IVP |
| 4760 | protein-transmembrane prediction | |||
| 6380 | 85 aa hypothetical protein | |||
| 6385 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1563ORF6385P | |
| 6390 | 154 aa hypothetical protein | |||
| 8050 | 168 aa hypothetical protein | |||
| 8055 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1563ORF8055P | |
| 8060 | DNA helicase | |||
| 8355 | IS481 family transposase | |||
| 8360 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1563ORF8360P | |
| 8365 | 348 aa hypothetical protein | |||
| 9235 | 342 aa hypothetical protein | |||
| 9240 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1563ORF9240P | |
| 9245 | replication protein | |||
| 9365 | 69 aa hypothetical protein | |||
| 9370 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha1563ORF9370P | |
| 9375 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha1563ORF9370P | |
| 9380 | 91 aa hypothetical protein | |||
| 10110 | sodium-dependent transporter | |||
| 10115 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1563ORF10115P |
| 10120 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7425 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mha1287ORF6875P (100% identity) | M.Mha1563ORF7430P | |
| ??? | R | Mha6055ORFAP (100% identity) | Mha1563ORF7430P | |
| 7450 | IS481 family transposase | |||
| 8990 | 4-hydroxybenzoate polyprenyltransferase | |||
| 8995 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1563ORF8995P |
| 9000 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1563ORF8995P |
| 9005 | DNA gyrase subunit B | |||