Mannheimia haemolytica 1498 |
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Putative Mannheimia haemolytica 1498 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,683,820 bp
GenBank #: CP017535
REBASE acronym: Mha1498
Org_num: 37880
All begin BG609_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3190 | methionine synthase | |||
| 3195 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha1498II |
| 3200 | type III restriction endonuclease subunit M | |||
| 3205 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1498II | |
| 3210 | 211 aa hypothetical protein | |||
| 3195 | type I restriction endonuclease subunit M | |||
| 3200 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha1498ORF3195P |
| 3205 | restriction endonuclease subunit S | |||
| 8740 | 125 aa hypothetical protein | |||
| ??? | M | M.Mha6ORFJP (100% identity) | M.Mha1498ORF8750P | |
| 8755 | S | S.PhaAI (100% identity) | S.Mha1498ORF8750P | |
| 8760 | R | Mhas183ORF4955P (100% identity) | Mha1498ORF8750P | |
| 8765 | bifunctional glutamine synthetase | |||
| 11770 | phosphatidylserine decarboxylase | |||
| 11775 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha1498IP |
| 11780 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha1498I |
| 11785 | transcriptional regulator | |||
| 11790 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha1498IP |
| 11795 | integrase | |||
| 11795 | integrase | |||
| 11800 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha1498ORF11780P |
| 11805 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1315 | helicase IV | |||
| 1320 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1498III |
| 1325 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1498III |
| 1330 | 188 aa hypothetical protein | |||
| 3070 | adhesin | |||
| 3075 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1498ORF3075P | |
| 3080 | S6 family igA-specific metalloendopeptidase | |||
| 5530 | protein-transmembrane prediction | |||
| 5535 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1498VP |
| 5540 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1498V |
| 5545 | 79 aa hypothetical protein | |||
| 6335 | 85 aa hypothetical protein | |||
| 6340 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1498ORF6340P | |
| 6345 | 154 aa hypothetical protein | |||
| 6460 | DNA helicase | |||
| 6465 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1498ORF6465P | |
| 6470 | 168 aa hypothetical protein | |||
| 8145 | 91 aa hypothetical protein | |||
| 8150 | M | M.Pba12565ORF6600P (100% identity) | M1.Mha1498ORF8150P | |
| 8155 | M | M.Pba12565ORF6605P (100% identity) | M2.Mha1498ORF8150P | |
| 8160 | 69 aa hypothetical protein | |||
| 8280 | replication protein | |||
| 8285 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1498ORF8285P | |
| 8290 | 342 aa hypothetical protein | |||
| 9380 | 348 aa hypothetical protein | |||
| 9385 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1498ORF9385P | |
| 9390 | IS481 family transposase | |||
| 10110 | sodium-dependent transporter | |||
| 10115 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1498ORF10115P |
| 10120 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7050 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1498ORF7065P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha1498ORF7065P | |
| 7075 | DNA methylase N-4/N-6 | |||
| 8515 | DNA gyrase subunit B | |||
| 8520 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1498IVP |
| 8525 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1498IV |
| 8530 | 4-hydroxybenzoate polyprenyltransferase | |||