Mannheimia haemolytica 1373 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia haemolytica 1373 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,782,661 bp
GenBank #: CP017544
REBASE acronym: Mha1373
Org_num: 37871
All begin BG581_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | methionine synthase | |||
| 3225 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | M.Mha1373II |
| 3230 | S | S1.Mhas183ORF10615P (99% identity) | CAACNNNNNTC | S1.Mha1373II |
| 3235 | S | S2.Mhas184ORF2820P (100% identity) | CAACNNNNNTC | S2.Mha1373II |
| 3240 | 211 aa hypothetical protein | |||
| 9355 | methyltransferase | |||
| ??? | M | M.MhaH23ORF2958P (100% identity) | M.Mha1373ORF9360P | |
| 9365 | S | S.PhaAI (100% identity) | S.Mha1373ORF9360P | |
| 9370 | R | Pba12565ORF4845P (100% identity) | Mha1373ORF9360P | |
| 9375 | bifunctional glutamine synthetase | |||
| 12400 | phosphatidylserine decarboxylase | |||
| 12405 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha1373IP |
| 12410 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha1373I |
| 12415 | transcriptional regulator | |||
| 12420 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.Mha1373I |
| 12425 | integrase | |||
| 12430 | S | S2.Mhas183ORF2125P (100% identity) | S2.Mha1373IP | |
| 12435 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1320 | helicase IV | |||
| 1325 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1373III |
| 1330 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1373III |
| 1335 | 188 aa hypothetical protein | |||
| 3100 | 234 aa hypothetical protein | |||
| 3105 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1373ORF3105P | |
| 3110 | S6 family igA-specific metalloendopeptidase | |||
| 4760 | 79 aa hypothetical protein | |||
| 4765 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1373IV |
| 4770 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1373IVP |
| 4775 | protein-transmembrane prediction | |||
| 5480 | 342 aa hypothetical protein | |||
| 5485 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1373ORF5485P | |
| 5490 | replication protein | |||
| 5610 | 69 aa hypothetical protein | |||
| 5615 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha1373ORF5615P | |
| 5620 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha1373ORF5615P | |
| 5625 | 91 aa hypothetical protein | |||
| 5935 | DNA helicase | |||
| 5940 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1373ORF5940P | |
| 5945 | 168 aa hypothetical protein | |||
| 7670 | 168 aa hypothetical protein | |||
| 7675 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1373ORF7675P | |
| 7680 | DNA helicase | |||
| 7795 | 154 aa hypothetical protein | |||
| 7800 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1373ORF7800P | |
| 7805 | 85 aa hypothetical protein | |||
| 9990 | 348 aa hypothetical protein | |||
| 9995 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1373ORF9995P | |
| 10000 | IS481 family transposase | |||
| 10735 | sodium-dependent transporter | |||
| 10740 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1373ORF10740P |
| 10745 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6510 | citrate (Si)-synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1373ORF6525P | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha1373ORF6525P | |
| 6535 | trimethylamine N-oxide reductase I catalytic | |||
| 9120 | DNA gyrase subunit B | |||
| 9125 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1373ORF9130P |
| 9130 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1373ORF9130P |
| 9135 | methyltransferase | |||