Mannheimia haemolytica 1318 |
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Putative Mannheimia haemolytica 1318 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,691,220 bp
GenBank #: CP017549
REBASE acronym: Mha1318
Org_num: 37866
All begin BG602_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3225 | methionine synthase | |||
| 3230 | M | M.Pba12565ORF10250P (100% identity) | M.Mha1318ORF3230P | |
| 3235 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha1318ORF3230P |
| 3240 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha1318ORF3230P | |
| 3245 | 211 aa hypothetical protein | |||
| 8505 | 125 aa hypothetical protein | |||
| ??? | M | M.MhaH23ORF2958P (100% identity) | M.Mha1318ORF8510P | |
| 8515 | S | S.PhaAI (100% identity) | S.Mha1318ORF8510P | |
| 8520 | R | Mhas183ORF4955P (100% identity) | Mha1318ORF8510P | |
| 8525 | bifunctional glutamine synthetase | |||
| 11530 | phosphatidylserine decarboxylase | |||
| 11535 | R | Pba12565ORF1955P (100% identity) | Mha1318ORF11540P | |
| 11540 | M | M.Pba12565ORF1955P (99% identity) | M.Mha1318ORF11540P | |
| 11545 | transcriptional regulator | |||
| 11550 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha1318ORF11540P |
| 11555 | integrase | |||
| 11560 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha1318ORF11540P |
| 11565 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1320 | helicase IV | |||
| 1325 | RM | Mha32619III (100% identity) | CTGAAG | Mha1318ORF1325P |
| 1330 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1318ORF1325P |
| 1335 | 188 aa hypothetical protein | |||
| 3105 | adhesin | |||
| 3110 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1318ORF3110P | |
| 3115 | S6 family igA-specific metalloendopeptidase | |||
| 4755 | 79 aa hypothetical protein | |||
| 4760 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1318ORF4760P |
| 4765 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1318ORF4760P |
| 4770 | protein-transmembrane prediction | |||
| 7880 | 168 aa hypothetical protein | |||
| 7885 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1318ORF7885P | |
| 7890 | DNA helicase | |||
| 8915 | 348 aa hypothetical protein | |||
| 8920 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1318ORF8920P | |
| 8925 | IS481 family transposase | |||
| 9870 | sodium-dependent transporter | |||
| 9875 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1318ORF9875P |
| 9880 | 3-dehydroquinate synthase | |||
| 12035 | 91 aa hypothetical protein | |||
| 12040 | M | M.Pba12565ORF6600P (100% identity) | M1.Mha1318ORF12040P | |
| 12045 | M | M.Pba12565ORF6605P (100% identity) | M2.Mha1318ORF12040P | |
| 12050 | 69 aa hypothetical protein | |||
| 12170 | replication protein | |||
| 12175 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1318ORF12175P | |
| 12180 | 342 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6875 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Pba12565ORF5515P (100% identity) | M.Mha1318ORF6880P | |
| 6890 | R | Pba12565ORF5515P (29% identity) | Mha1318ORF6880AP | |
| 6895 | IS481 family transposase | |||
| 6900 | R | Pba12565ORF5515P (56% identity) | Mha1318ORF6880BP | |
| 6905 | citrate (Si)-synthase | |||
| 8275 | DNA gyrase subunit B | |||
| 8280 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1318ORF8285P |
| 8285 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1318ORF8285P |
| 8290 | adenine methyltransferase | |||