Mannheimia haemolytica 1287 |
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Putative Mannheimia haemolytica 1287 RM systems
Ref: Clawson,M.L. et al. unpublished
REBASE ref # 29745
Complete sequence: 2,749,831 bp
GenBank #: CP017551
REBASE acronym: Mha1287
Org_num: 37864
All begin BG585_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3235 | methionine synthase | |||
| 3240 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | M.Mha1287II |
| 3245 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S1.Mha1287II |
| 3250 | S | S2.Mhas184ORF2820P (100% identity) | CAACNNNNNTC | S2.Mha1287II |
| 3255 | 211 aa hypothetical protein | |||
| 8560 | ANT(3)-Ia family aminoglycoside | |||
| 8565 | M | M.Mha1503ORF8815P (100% identity) | M.Mha1287ORF8565P | |
| 8570 | tetracycline efflux MFS transporter Tet(H) | |||
| 9115 | methyltransferase | |||
| ??? | M | M.MhaH23ORF2958P (100% identity) | M.Mha1287ORF9120P | |
| 9125 | S | S.PhaAI (100% identity) | S.Mha1287ORF9120P | |
| 9130 | R | Pba12565ORF4845P (100% identity) | Mha1287ORF9120P | |
| 9135 | bifunctional glutamine synthetase | |||
| 12135 | phosphatidylserine decarboxylase | |||
| 12140 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha1287IP |
| 12145 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha1287I |
| 12150 | transcriptional regulator | |||
| 12155 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha1287I |
| 12160 | integrase | |||
| 12165 | S | S1.MhaGHORF4030P (100% identity) | S2.Mha1287IP | |
| 12170 | bifunctional glutamate--cysteine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1330 | helicase IV | |||
| 1335 | RM | Mhas183ORF12540P (100% identity) | CTGAAG | Mha1287III |
| 1340 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha1287III |
| 1345 | 188 aa hypothetical protein | |||
| 3115 | adhesin | |||
| 3120 | M | M.Pba12565ORF10370P (100% identity) | M.Mha1287ORF3120P | |
| 3125 | S6 family igA-specific metalloendopeptidase | |||
| 4770 | 79 aa hypothetical protein | |||
| 4775 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha1287IV |
| 4780 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha1287IVP |
| 4785 | protein-transmembrane prediction | |||
| 5490 | 342 aa hypothetical protein | |||
| 5495 | M | M.Pba12565ORF4970P (100% identity) | M.Mha1287ORF5495P | |
| 5500 | replication protein | |||
| 5620 | 69 aa hypothetical protein | |||
| 5625 | M | M.Pba12565ORF6605P (100% identity) | M1.Mha1287ORF5625P | |
| 5630 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha1287ORF5625P | |
| 5635 | 91 aa hypothetical protein | |||
| 5740 | DNA helicase | |||
| 5745 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1287ORF5745P | |
| 5750 | 168 aa hypothetical protein | |||
| 7475 | 168 aa hypothetical protein | |||
| 7480 | M | M.Pba12565ORF7080P (100% identity) | M.Mha1287ORF7480P | |
| 7485 | DNA helicase | |||
| 7600 | 154 aa hypothetical protein | |||
| 7605 | M | M.Mhas183ORF7435P (100% identity) | M.Mha1287ORF7605P | |
| 7610 | 85 aa hypothetical protein | |||
| 9745 | 348 aa hypothetical protein | |||
| 9750 | M | M.Pba12565ORF4290P (100% identity) | M.Mha1287ORF9750P | |
| 9755 | IS481 family transposase | |||
| 10475 | sodium-dependent transporter | |||
| 10480 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha1287ORF10480P |
| 10485 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6870 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mha1563ORF7430P (100% identity) | M.Mha1287ORF6875P | |
| ??? | R | Pba12565ORF5515P (100% identity) | Mha1287ORF6875P | |
| 6895 | citrate (Si)-synthase | |||
| 8880 | DNA gyrase subunit B | |||
| 8885 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha1287ORF8890P |
| 8890 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha1287ORF8890P |
| 8895 | methyltransferase | |||