Ref: Phan,H.T.T. et al. unpublished

REBASE ref # 28955

Sequence length:GenBank #:
Chromosome: 3,895,111 bp CP042364
plasmid pC54_001: 256,887 bp CP042365

REBASE acronym: ApiC54

Org_num: 35806

 

All begin FR838_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
16085 restriction endonuclease subunit S
16090 M M.AjuYR7ORF2745P (98% identity) M.ApiC54ORF16090P
16095 S S.AveWP9ORF25640P (33% identity) S.ApiC54ORF16090P
16100 DUF1016 family protein
16105 deoxyguanosinetriphosphate triphosphohydrolase
16110 R Aba103ORF805P (98% identity) ApiC54ORF16090P
16115 M48 family metallopeptidase
 
plasmid pC54_001
 
19235 144 aa hypothetical protein
19240 M M.Ajo082ORF16905P (99% identity) M.ApiC54ORF19240P
19245 S S.Ajo082ORF16905P (100% identity) S.ApiC54ORF19240P
19250 Abi family protein
19255 R Ajo082ORF16905P (100% identity) ApiC54ORF19240P
19260 ISL3 family transposase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
11595 bifunctional
11600 M M.AspRaihORFBP (100% identity) RAATTY M.ApiC54ORF11600P
11605 riboflavin synthase
 
18420 DUF935 domain-containing protein
18425 M M.Aba202ORF2181P (98% identity) M.ApiC54ORF18425P
18430 253 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
9030 tyrosine-type recombinase/integrase
9035 R Aur116ORF4340P (100% identity) ApiC54ORF9040P
9040 M M.Aur116ORF4340P (100% identity) M.ApiC54ORF9040P
9045 210 aa hypothetical protein