Neisseria gonorrhoeae SS3160 |
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Putative Neisseria gonorrhoeae SS3160 RM systems
Ref: Miyake,H. et al. unpublished
REBASE ref # 29537
Complete sequence: 2,214,955 bp
GenBank #: AP019853
REBASE acronym: Ngo3160
Org_num: 37383
All begin NGSS3160_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3920 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 3930 | M | M.NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | M.Ngo3160ORF3930P |
| 3940 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoTFGB2ORFAP (100% identity) | GCANNNNNNNGTC | S.Ngo3160ORF3930P |
| 3970 | R | NgoSH240ORFMP (100% identity) | GCANNNNNNNGTC | Ngo3160ORF3930P |
| 3980 | ATP-dependent Clp protease ATP-binding subunit | |||
| 6880 | ATPase AAA | |||
| 6890 | R | NgoSH240ORFBP (100% identity) | GAGNNNNNTAC | Ngo3160ORF6930P |
| 6900 | 77 aa hypothetical protein | |||
| 6910 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo3160ORF6930P |
| 6920 | 186 aa hypothetical protein | |||
| 6930 | 279 aa hypothetical protein | |||
| 6940 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo3160ORF6930P |
| 6950 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | leucine--tRNA ligase | |||
| ??? | R | NgoWGORF7P (100% identity) | GATC | Ngo3160ORF80P |
| 80 | M | M.NgoWSORF8P (100% identity) | M.Ngo3160ORF80P | |
| 90 | 151 aa hypothetical protein | |||
| 60 | leucine--tRNA ligase | |||
| 70 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3160ORF70P |
| 80 | methyltransferase | |||
| 2880 | phenylalanine--tRNA ligase alpha subunit | |||
| 2890 | V | V.NgoWSORF391P (100% identity) | V.Ngo3160ORF2900P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo3160ORF2900P | |
| 2920 | R | NgoWSORF391P (100% identity) | Ngo3160ORF2900P | |
| 2930 | phenylalanine--tRNA ligase beta subunit | |||
| 3440 | 215 aa hypothetical protein | |||
| 3450 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo3160ORF3450P |
| 3460 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo3160ORF3450P |
| 3470 | 140 aa hypothetical protein | |||
| 3510 | uroporphyrinogen decarboxylase | |||
| 3520 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo3160ORF3540P | |
| 3530 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3160ORF3540P |
| 3540 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3160ORF3540P |
| 3550 | 81 aa hypothetical protein | |||
| 6630 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo3160ORF6660P |
| 6660 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3160ORF6660P |
| 6670 | 3-isopropylmalate dehydratase small subunit | |||
| 9150 | anthranilate synthase component 1 | |||
| 9160 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo3160ORF9130P |
| 9170 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3160ORF9130P |
| 9180 | N5-carboxyaminoimidazole ribonucleotide | |||
| 11720 | replication initiation factor | |||
| 11730 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3160ORF11760P | |
| ??? | R | NgoWSORF1801P (100% identity) | Ngo3160ORF11760P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo3160ORF11760P | |
| 11770 | 48 aa hypothetical protein | |||
| 12120 | UvrABC system protein A | |||
| 12130 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3160ORF12130P |
| 12140 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3160ORF12130P |
| 12150 | 62 aa hypothetical protein | |||
| 18350 | membrane protein | |||
| 18360 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo3160ORF18370P |
| 18370 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo3160ORF18370P |
| 18380 | ribosome-recycling factor | |||
| 19310 | sodium/glutamate symporter | |||
| 19320 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo3160ORF19340P |
| 19330 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo3160ORF19340P |
| 19340 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo3160ORF19340P |
| 19350 | RNA-binding protein | |||
| 20360 | GTPase Obg | |||
| 20370 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo3160ORF20390P |
| 20380 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo3160ORF20390P |
| 20390 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5340 | peptidyl-prolyl cis-trans isomerase | |||
| 5350 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo3160ORF5340P |
| 5360 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo3160ORF5340P |
| 5370 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 6290 | alpha-hydroxy-acid oxidizing enzyme | |||
| 6300 | R | NgoSH240ORFJP (100% identity) | Ngo3160ORF6310P | |
| ??? | M | M.NgoSH203ORFNP (100% identity) | M.Ngo3160ORF6310P | |
| 6330 | tRNA pseudouridine synthase B | |||