Ref: Miyake,H. et al. unpublished

REBASE ref # 29537

Complete sequence: 2,214,955 bp

GenBank #: AP019853

REBASE acronym: Ngo3160

Org_num: 37383

 

All begin NGSS3160_

Type I
ORF Gene Most similar Specificity Name
 
3920 ADP-L-glycero-D-manno-heptose-6-epimerase
3930 M M.NgoSH240ORFMP (100% identity) GCANNNNNNNGTC M.Ngo3160ORF3930P
3940 DNA damage-inducible protein D
??? S S.NgoTFGB2ORFAP (100% identity) GCANNNNNNNGTC S.Ngo3160ORF3930P
3970 R NgoSH240ORFMP (100% identity) GCANNNNNNNGTC Ngo3160ORF3930P
3980 ATP-dependent Clp protease ATP-binding subunit
 
6880 ATPase AAA
6890 R NgoSH240ORFBP (100% identity) GAGNNNNNTAC Ngo3160ORF6930P
6900 77 aa hypothetical protein
6910 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo3160ORF6930P
6920 186 aa hypothetical protein
6930 279 aa hypothetical protein
6940 M M.NgoWSI (100% identity) GAGNNNNNTAC M.Ngo3160ORF6930P
6950 3,4-dihydroxy-2-butanone-4-phosphate synthase
Type II
ORF Gene Most similar Specificity Name
 
60 leucine--tRNA ligase
??? R NgoWGORF7P (100% identity) GATC Ngo3160ORF80P
80 M M.NgoWSORF8P (100% identity) M.Ngo3160ORF80P
90 151 aa hypothetical protein
 
60 leucine--tRNA ligase
70 R NgoWSORF8P (100% identity) GATC Ngo3160ORF70P
80 methyltransferase
 
2880 phenylalanine--tRNA ligase alpha subunit
2890 V V.NgoWSORF391P (100% identity) V.Ngo3160ORF2900P
??? M M.NgoWSORF391P (100% identity) M.Ngo3160ORF2900P
2920 R NgoWSORF391P (100% identity) Ngo3160ORF2900P
2930 phenylalanine--tRNA ligase beta subunit
 
3440 215 aa hypothetical protein
3450 RM NgoWSORF450P (100% identity) GACNNNNNTGA Ngo3160ORF3450P
3460 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo3160ORF3450P
3470 140 aa hypothetical protein
 
3510 uroporphyrinogen decarboxylase
3520 H H.NgoWSORF459P (100% identity) H.Ngo3160ORF3540P
3530 R NgoWSORF459P (100% identity) GCSGC Ngo3160ORF3540P
3540 M M.NgoWSORF459P (100% identity) GCSGC M.Ngo3160ORF3540P
3550 81 aa hypothetical protein
 
6630 3-isopropylmalate dehydrogenase
??? R NgoSH240ORFIP (100% identity) GGNNCC Ngo3160ORF6660P
6660 M M.NmeM395ORFKP (100% identity) GGNNCC M.Ngo3160ORF6660P
6670 3-isopropylmalate dehydratase small subunit
 
9150 anthranilate synthase component 1
9160 M M.NgoWLORF1156P (100% identity) GCCGGC M.Ngo3160ORF9130P
9170 R NgoWSORF1056P (100% identity) GCCGGC Ngo3160ORF9130P
9180 N5-carboxyaminoimidazole ribonucleotide
 
11720 replication initiation factor
11730 V V.NgoWSORF1801P (100% identity) V.Ngo3160ORF11760P
??? R NgoWSORF1801P (100% identity) Ngo3160ORF11760P
??? M M.Ngos1291ORF65P (100% identity) M.Ngo3160ORF11760P
11770 48 aa hypothetical protein
 
12120 UvrABC system protein A
12130 R NgoWSORF259P (100% identity) CCGCGG Ngo3160ORF12130P
12140 M M.NgoWSORF259P (100% identity) CCGCGG M.Ngo3160ORF12130P
12150 62 aa hypothetical protein
 
18350 membrane protein
18360 R NgoSH240ORFKP (100% identity) GGCC Ngo3160ORF18370P
18370 M M.NgoWSORF2276P (100% identity) GGCC M.Ngo3160ORF18370P
18380 ribosome-recycling factor
 
19310 sodium/glutamate symporter
19320 R NgoWSIIIP (100% identity) GGTGA Ngo3160ORF19340P
19330 M M2.NgoWSIII (100% identity) GGTGA M1.Ngo3160ORF19340P
19340 M M1.NgoWSIII (100% identity) GGTGA M2.Ngo3160ORF19340P
19350 RNA-binding protein
 
20360 GTPase Obg
20370 M M.NgoWSORF2052P (100% identity) RGCGCY M.Ngo3160ORF20390P
20380 R NgoSH240ORFCP (91% identity) RGCGCY Ngo3160ORF20390P
20390 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
5340 peptidyl-prolyl cis-trans isomerase
5350 M M.NgoWSORF647P (100% identity) CCACC M.Ngo3160ORF5340P
5360 R NgoWSORF647P (100% identity) CCACC Ngo3160ORF5340P
5370 tRNA 2-thiocytidine biosynthesis protein TtcA
 
6290 alpha-hydroxy-acid oxidizing enzyme
6300 R NgoSH240ORFJP (100% identity) Ngo3160ORF6310P
??? M M.NgoSH203ORFNP (100% identity) M.Ngo3160ORF6310P
6330 tRNA pseudouridine synthase B