Planctomycetes bacterium KS4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Planctomycetes bacterium KS4 RM systems
Ref: Wiegand,S. et al. unpublished
REBASE ref # 29516
Complete sequence: 4,291,168 bp
GenBank #: CP036425
REBASE acronym: PbaKS4
Org_num: 37311
All begin KS4_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2340 | SprT-like family protein | |||
| 2350 | R | IceTR32ORF8960P (60% identity) | PbaKS4ORF2370P | |
| 2360 | S | S.IceTR32ORF8960P (38% identity) | S.PbaKS4ORF2370P | |
| 2370 | M | M.Vru23124ORFAP (51% identity) | M.PbaKS4ORF2370P | |
| 2380 | Restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10630 | pseudogene | |||
| 10640 | V | V.PbaCA11ORF53050P (66% identity) | V.PbaKS4ORF10650P | |
| 10650 | M | M.Msp22773ORF115P (45% identity) | M.PbaKS4ORF10650P | |
| 10660 | site-specific tyrosine recombinase XerC | |||
| 10760 | 772 aa hypothetical protein | |||
| 10770 | M | M.PbaMal52ORF28070P (67% identity) | M.PbaKS4ORF10770P | |
| 10780 | 71 aa hypothetical protein | |||
| 14810 | ABC transporter ATP-binding protein | |||
| 14820 | M | M.PbaZRK32ORF18725P (79% identity) | M.PbaKS4ORF14820P | |
| 14830 | 106 aa hypothetical protein | |||
| 23630 | 73 aa hypothetical protein | |||
| 23640 | M | M.Gel16401IV (50% identity) | M.PbaKS4ORF23640P | |
| 23650 | 169 aa hypothetical protein | |||
| 32330 | 459 aa hypothetical protein | |||
| 32340 | M | M.PbaZRK32ORF7190P (87% identity) | M.PbaKS4ORF32340P | |
| 32350 | 69 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11020 | RNA polymerase-associated protein RapA | |||
| 11030 | M | M.Dch1ORF18960P (46% identity) | M.PbaKS4ORF11030P | |
| 11040 | R | NspENR4ORF529P (35% identity) | PbaKS4ORF11030P | |
| 11050 | 231 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2370 | Type I restriction enzyme EcoKI M protein | |||
| 2380 | R | PspC31Mrr2P (49% identity) | PbaKS4MrrP | |
| 2390 | 146 aa hypothetical protein | |||