Lactobacillus paracasei NJ |
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Putative Lactobacillus paracasei NJ RM systems
Ref: Cai,Y. unpublished
REBASE ref # 29514
Complete sequence: 3,083,412 bp
GenBank #: CP041944
REBASE acronym: LpaNJ
Org_num: 37292
All begin FO269_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11645 | 188 aa hypothetical protein | |||
| 11650 | R | LpaXI3ORFBP (100% identity) | LpaNJORF11655P | |
| 11655 | M | M.LpaXI3ORFBP (100% identity) | M.LpaNJORF11655P | |
| 11660 | S | S1.LpaOF10ORF5340P (100% identity) | S1.LpaNJORF11655P | |
| 11665 | site-specific integrase | |||
| 11670 | S | S1.LpaST2ORF3180P (100% identity) | S2.LpaNJORF11655P | |
| 11675 | DUF262 domain-containing protein | |||
| 12340 | glutamine-hydrolyzing GMP synthase | |||
| 12345 | M | M.LpaOF10ORF5960P (100% identity) | M.LpaNJORF12345P | |
| 12350 | S | S.LpaOF10ORF5960P (100% identity) | S.LpaNJORF12345P | |
| 12355 | R | LpaOF10ORF5960P (100% identity) | LpaNJORF12345P | |
| 12360 | nucleotidyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3805 | IS5 family transposase | |||
| 3810 | R | LpaOF10ORF12795P (100% identity) | LpaNJORF3815P | |
| 3815 | M | M.Lpl16ORF12P (98% identity) | M.LpaNJORF3815P | |
| 3820 | recombinase family protein | |||
| 9115 | 73 aa hypothetical protein | |||
| 9120 | M | M.LpaOF10ORF3015P (100% identity) | M.LpaNJORF9120P | |
| 9125 | 108 aa hypothetical protein | |||
| 12430 | 115 aa hypothetical protein | |||
| 12435 | M | M.LpaXI3ORFCP (98% identity) | M.LpaNJORF12435P | |
| 12440 | helix-turn-helix transcriptional regulator | |||