Leptotrichia hofstadii JCM16775 |
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Putative Leptotrichia hofstadii JCM16775 RM systems
Ref: Watanabe,S. and Cui,L. unpublished
REBASE ref # 27415
Complete sequence: 2,548,198 bp
GenBank #: AP019823
REBASE acronym: Lho16775
Org_num: 37173
All begin JCM16775_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2300 | pseudogene | |||
| 2301 | R | SmoLIIIP (90% identity) | Lho16775ORF2303P | |
| 2302 | S | S.Mov2AORF2495P (57% identity) | S.Lho16775ORF2303P | |
| 2303 | M | M.SmoLIII (89% identity) | M.Lho16775ORF2303P | |
| 2304 | 266 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 154 | 209 aa hypothetical protein | |||
| 155 | RM | LspF0708ORF6835P (84% identity) | Lho16775ORF155P | |
| 156 | 251 aa hypothetical protein | |||
| 840 | lipoate protein ligase A | |||
| 841 | M | M1.Fnu3036ORF6585P (69% identity) | M1.Lho16775ORF841P | |
| 842 | M | M2.Fnu3036ORF6585P (62% identity) | M2.Lho16775ORF841P | |
| 843 | 571 aa hypothetical protein | |||
| 883 | 158 aa hypothetical protein | |||
| 884 | M | M.Lho254ORF1382P (89% identity) | M.Lho16775ORF884P | |
| 885 | adenylosuccinate lyase | |||
| 886 | 184 aa hypothetical protein | |||
| 887 | 50 aa hypothetical protein | |||
| 888 | TPR repeat-containing protein | |||
| 889 | V | V.Lsp847ORF2860P (77% identity) | V.Lho16775ORF884P | |
| 890 | 429 aa hypothetical protein | |||
| 2015 | 218 aa hypothetical protein | |||
| 2016 | RM | PmeBin78ORFAP (67% identity) | Lho16775ORF2016P | |
| 2017 | methyltransferase | |||
| 2270 | aspartyl/glutamyl-tRNA amidotransferase subunit | |||
| 2271 | M | M.Ltr4039ORF175P (96% identity) | M.Lho16775ORF2271P | |
| 2272 | type-2 restriction enzyme HpaI | |||
| 2271 | modification methylase HpaI | |||
| 2272 | R | LspF0590IIP (75% identity) | Lho16775ORF2272P | |
| 2273 | aspartyl/glutamyl-tRNA amidotransferase subunit | |||
| 2275 | aspartyl/glutamyl-tRNA amidotransferase subunit | |||
| 2276 | M | M.Lho5056ORF2016P (94% identity) | M.Lho16775ORF2276P | |
| 2277 | R | Lsp10393IIP (88% identity) | Lho16775ORF2276P | |
| 2278 | HAD-superfamily hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 742 | 89 aa hypothetical protein | |||
| 743 | M | M.Lsp225ORF5295P (99% identity) | M.Lho16775ORF743P | |
| 744 | 160 aa hypothetical protein | |||
| 745 | R | Lsp225ORF5295P (99% identity) | Lho16775ORF743P | |
| 746 | 86 aa hypothetical protein | |||