Lachnospiraceae bacterium KGMB03038 |
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Putative Lachnospiraceae bacterium KGMB03038 RM systems
Ref: Kim,J.-S. et al. unpublished
REBASE ref # 29571
Complete sequence: 3,334,474 bp
GenBank #: CP041667
REBASE acronym: Lba3038
Org_num: 37460
All begin FND36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3975 | nucleotidyltransferase domain-containing | |||
| 3980 | M | M.PmeBin39ORFFP (84% identity) | M.Lba3038ORF3980P | |
| 3985 | S | S1.PmeBin244ORFAP (35% identity) | S1.Lba3038ORF3980P | |
| 3990 | DUF3990 domain-containing protein | |||
| 3995 | 153 aa hypothetical protein | |||
| 4000 | tyrosine-type recombinase/integrase | |||
| 4005 | S | S.Fsp81399ORF10000P (42% identity) | S2.Lba3038ORF3980P | |
| 4010 | R | PmeBin39ORFFP (82% identity) | Lba3038ORF3980P | |
| 4015 | 338 aa hypothetical protein | |||
| 5850 | helix-turn-helix transcriptional regulator | |||
| 5855 | M | M.Lba3038ORFDP (100% identity) | M.Lba3038ORF5855P | |
| 5860 | S | S.Lba3038ORFDP (100% identity) | S.Lba3038ORF5855P | |
| 5865 | 356 aa hypothetical protein | |||
| 5850 | helix-turn-helix transcriptional regulator | |||
| 5855 | M | M.Lba3038ORF5855P (100% identity) | M.Lba3038ORFDP | |
| 5860 | S | S.Lba3038ORF5855P (100% identity) | S.Lba3038ORFDP | |
| 5865 | 356 aa hypothetical protein | |||
| 14415 | IS256 family transposase | |||
| 14420 | S | S1.PmeBin612ORFAP (54% identity) | S.Lba3038ORF14425P | |
| 14425 | M | M.Isp26ORF8705P (87% identity) | M.Lba3038ORF14425P | |
| 14430 | R | PmeBin612ORFAP (74% identity) | Lba3038ORF14425P | |
| 14435 | TetR/AcrR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1975 | conjugal transfer protein TraE | |||
| 1980 | M | M.Lba3038ORFGP (100% identity) | M.Lba3038ORF1980P | |
| 1985 | hydrolase | |||
| 1975 | conjugal transfer protein TraE | |||
| 1980 | M | M.Lba3038ORF1980P (100% identity) | M.Lba3038ORFGP | |
| 1985 | hydrolase | |||
| 2835 | DUF4373 domain-containing protein | |||
| 2840 | M | M.CscNTI82ORF3074P (80% identity) | M.Lba3038ORF2840P | |
| 2845 | tyrosine-type recombinase/integrase | |||
| 3090 | IMP dehydrogenase | |||
| 3095 | M | M.Lba3038ORFFP (98% identity) | M.Lba3038ORF3095P | |
| 3100 | zinc dependent phospholipase C family protein | |||
| 3090 | IMP dehydrogenase | |||
| ??? | M | M.Lba3038ORF3095P (98% identity) | M.Lba3038ORFFP | |
| 3100 | zinc dependent phospholipase C family protein | |||
| 3685 | 289 aa hypothetical protein | |||
| 3690 | M | M.PmeBin148ORFAP (100% identity) | M.Lba3038ORFEP | |
| 3695 | PrgI family protein | |||
| 3685 | 289 aa hypothetical protein | |||
| 3690 | M | M.PmeBin148ORFAP (100% identity) | M.Lba3038ORF3690P | |
| 3695 | PrgI family protein | |||
| 11090 | peptidase M23 | |||
| 11095 | M | M.RbrL2ORF950P (100% identity) | M.Lba3038ORFAP | |
| 11100 | conjugal transfer protein TraE | |||
| 11105 | PrgI family protein | |||
| ??? | M | M.PmeBin308ORFDP (100% identity) | M.Lba3038ORFBP | |
| 11120 | conjugal transfer protein | |||
| 11105 | PrgI family protein | |||
| 11110 | M | M.RbrL2ORF920P (100% identity) | M.Lba3038ORF11110P | |
| 11115 | 283 aa hypothetical protein | |||
| 13900 | CHAP domain-containing protein | |||
| 13905 | M | M.RtoL2ORF21070P (100% identity) | CCSSGG | M.Lba3038ORFCP |
| 13910 | conjugal transfer protein TraE | |||
| 13900 | CHAP domain-containing protein | |||
| 13905 | M | M.RtoL2ORF21070P (100% identity) | CCSSGG | M.Lba3038ORF13905P |
| 13910 | conjugal transfer protein TraE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6740 | spore coat associated protein CotJA | |||
| 6745 | M | M.Msp3756ORFJP (40% identity) | M.Lba3038ORF6745P | |
| 6750 | R | OspNSJ62ORF2015P (65% identity) | Lba3038ORF6745P | |
| 6755 | class II fructose-1,6-bisphosphate aldolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14080 | 170 aa hypothetical protein | |||
| 14085 | R | Lba3038McrC2P (100% identity) | Lba3038McrCP | |
| 14090 | ATPase | |||
| 14095 | IS256 family transposase | |||
| 14100 | R | Lba3038McrB2P (100% identity) | Lba3038McrBP | |
| 14105 | 81 aa hypothetical protein | |||
| 14080 | 170 aa hypothetical protein | |||
| 14085 | R | Lba3038McrCP (100% identity) | Lba3038McrC2P | |
| 14090 | ATPase | |||
| 14095 | IS256 family transposase | |||
| 14100 | R | Lba3038McrBP (100% identity) | Lba3038McrB2P | |
| 14105 | 81 aa hypothetical protein | |||
| 14305 | (deoxy)nucleoside triphosphate | |||
| 14310 | R | Msp3756ORFGBP (66% identity) | Lba3038ORF14310P | |
| 14315 | ATP-binding protein | |||