Escherichia coli 405 |
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Putative Escherichia coli 405 RM systems
Ref: Song,W. unpublished
REBASE ref # 29278
| Sequence length: | GenBank #: | |
| Chromosome: | 5,047,719 bp | CP041563 |
| plasmid p168-2: | 97,001 bp | CP041565 |
| plasmid p168-3: | 92,497 bp | CP041566 |
| plasmid p168-6: | 109,120 bp | CP041569 |
| plasmid p168-7: | 93,108 bp | CP041570 |
REBASE acronym: Eco405
Org_num: 36656
All begin FNJ69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21200 | endoribonuclease SymE | |||
| 21205 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco405ORF21210P |
| 21210 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco405ORF21210P |
| 21215 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | Eco405ORF21210P |
| 21220 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7925 | drug/metabolite exporter YedA | |||
| 7930 | V | V.SflSTLE3DcmP (100% identity) | V.Eco405DcmP | |
| 7935 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco405DcmP |
| 7940 | HD domain-containing protein | |||
| 8955 | 330 aa hypothetical protein | |||
| 8960 | M | M.Sbo812ORFEP (100% identity) | M.Eco405ORF8960P | |
| 8965 | replication endonuclease | |||
| 15180 | DNA-binding transcriptional regulator Fis | |||
| 15185 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco405ORF15185P |
| 15190 | DUF2556 domain-containing protein | |||
| 15715 | ribulose-phosphate 3-epimerase | |||
| 15720 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco405DamP |
| 15725 | cell division protein DamX | |||
| plasmid p168-2 | ||||
| 25625 | 73 aa hypothetical protein | |||
| 25630 | M | M.Sso866ORF27155P (100% identity) | M.Eco405ORF25630P | |
| 25635 | 102 aa hypothetical protein | |||
| plasmid p168-3 | ||||
| 26430 | 103 aa hypothetical protein | |||
| 26435 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco405ORF26435P |
| 26440 | 54 aa hypothetical protein | |||
| plasmid p168-7 | ||||
| 28045 | 95 aa hypothetical protein | |||
| 28050 | M | M.EcoEC361ORF1680P (91% identity) | M.Eco405ORF28050P | |
| 28055 | 226 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21215 | type I restriction-modification system | |||
| 21220 | R | EcosS1MrrP (100% identity) | Eco405MrrP | |
| 21225 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p168-6 | ||||
| 27520 | 269 aa hypothetical protein | |||
| 27525 | M | M.Sso524ORF460P (100% identity) | M.Eco405ORF27525P | |
| 27530 | 75 aa hypothetical protein | |||