Escherichia coli 95 |
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Putative Escherichia coli 95 RM systems
Ref: Song,W. unpublished
REBASE ref # 29278
| Sequence length: | GenBank #: | |
| Chromosome: | 4,959,127 bp | CP041526 |
| Chromosome: | 5,127,303 bp | CP041535 |
| plasmid p3409-1: | 76,639 bp | CP041536 |
| plasmid p3409-2: | 76,032 bp | CP041537 |
| plasmid p5696-1: | 91,974 bp | CP041527 |
REBASE acronym: Eco41535
Org_num: 36663
All begin FNJ77_, FNJ81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8555 | 322 aa hypothetical protein | |||
| 8560 | R | SflC32ORFCP (100% identity) | Eco41526ORF8565P | |
| 8565 | M | M.SspS13ORF3945P (100% identity) | M.Eco41526ORF8565P | |
| 8570 | S | S.SflC32ORFCP (100% identity) | S.Eco41526ORF8565P | |
| 8575 | endoribonuclease SymE | |||
| Chromosome | ||||
| 20730 | endoribonuclease SymE | |||
| 20735 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco41535ORF20740P |
| 20740 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco41535ORF20740P |
| 20745 | R | EcosS1ORF16790P (99% identity) | CCANNNNNNNCTTC | Eco41535ORF20740P |
| 20750 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1505 | 73 aa hypothetical protein | |||
| 1525 | M | M.EcoY26ORF70P (100% identity) | A | M.Eco41526ORF1525P |
| 1530 | TrmB family transcriptional regulator | |||
| 6480 | 253 aa hypothetical protein | |||
| 6485 | R | Ecos67ORF8885P (100% identity) | Eco41526ORF6490P | |
| 6490 | M | M.Ecos67ORF8885P (100% identity) | M.Eco41526ORF6490P | |
| 6495 | 59 aa hypothetical protein | |||
| 9160 | 87 aa hypothetical protein | |||
| 9165 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco41526ORF9165P |
| 9170 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco41526ORF9165P |
| 9175 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco41526ORF9165P |
| 9180 | DUF4102 domain-containing protein | |||
| 13120 | 71 aa hypothetical protein | |||
| 13125 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco41526ORF13125P | |
| 13130 | helix-turn-helix domain-containing protein | |||
| 14750 | cell division protein DamX | |||
| 14755 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco41526DamP |
| 14760 | ribulose-phosphate 3-epimerase | |||
| 15355 | DUF2556 domain-containing protein | |||
| 15360 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco41526ORF15360P |
| 15365 | DNA-binding transcriptional regulator Fis | |||
| 22710 | phosphohydrolase | |||
| 22715 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco41526DcmP |
| 22720 | V | V.EcosEC7DcmP (100% identity) | V.Eco41526DcmP | |
| 22725 | drug/metabolite exporter YedA | |||
| Chromosome | ||||
| 1275 | 71 aa hypothetical protein | |||
| 1280 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco41535ORF1280P | |
| 1285 | helix-turn-helix domain-containing protein | |||
| 3105 | TrmB family transcriptional regulator | |||
| 3110 | M | M.SboBSORF1444P (100% identity) | A | M.Eco41535ORF3110P |
| 3130 | 73 aa hypothetical protein | |||
| 6680 | drug/metabolite exporter YedA | |||
| 6685 | V | V.SflC32DcmP (74% identity) | V.Eco41535DcmP | |
| 6690 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco41535DcmP |
| 6695 | phosphohydrolase | |||
| 9130 | Com family DNA-binding transcriptional | |||
| 9135 | M | M.EcoSO178ORF2370P (100% identity) | M.Eco41535ORF9135P | |
| 9140 | 4-phosphoerythronate dehydrogenase | |||
| 11050 | LexA family transcriptional regulator | |||
| 11055 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco41535ORF11055P |
| 11060 | PerC family transcriptional regulator | |||
| 14415 | DNA-binding transcriptional regulator Fis | |||
| 14420 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco41535ORF14420P |
| 14425 | DUF2556 domain-containing protein | |||
| 14950 | ribulose-phosphate 3-epimerase | |||
| 14955 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco41535DamP |
| 14960 | cell division protein DamX | |||
| 20145 | 527 aa hypothetical protein | |||
| 20150 | R | EcosS3ORF15775P (100% identity) | Eco41535ORF20155P | |
| 20155 | M | M.EcosS3ORF15775P (100% identity) | M.Eco41535ORF20155P | |
| 20160 | 81 aa hypothetical protein | |||
| 20480 | 59 aa hypothetical protein | |||
| 20485 | R | Ecoi127aORF4076P (100% identity) | Eco41535ORF20485P | |
| 20490 | HNH endonuclease | |||
| plasmid p3409-1 | ||||
| 25525 | 0 aa hypothetical protein | |||
| 25530 | M | M.Sfl7ORF23565P (100% identity) | M.Eco41535ORF25530P | |
| 25535 | 73 aa hypothetical protein | |||
| plasmid p3409-2 | ||||
| 26400 | 73 aa hypothetical protein | |||
| 26405 | M | M.Sfl2142ORF380P (100% identity) | M.Eco41535ORF26405P | |
| 26410 | 102 aa hypothetical protein | |||
| plasmid p5696-1 | ||||
| 24785 | 0 aa hypothetical protein | |||
| 24790 | M | M.Sen143ORF26480P (100% identity) | M.Eco41526ORF24790P | |
| 24795 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10845 | DinI family protein | |||
| 10850 | R | EspFAAGmrSDP (100% identity) | Eco41535GmrSDP | |
| 10855 | 41 aa hypothetical protein | |||
| 20745 | type I restriction-modification system | |||
| 20750 | R | EcosS1MrrP (100% identity) | Eco41535MrrP | |
| 20755 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | recombination protein NinB | |||
| 2270 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco41535ORF2270P |
| 2275 | NinE family protein | |||