Neisseria gonorrhoeae NJ189125 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae NJ189125 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 29424
Complete sequence: 2,185,626 bp
GenBank #: CP041586
REBASE acronym: Ngo9125
Org_num: 37066
All begin FNL99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2200 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2205 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo9125ORF2205P | |
| 2210 | DNA damage-inducible protein D | |||
| 2215 | S | S.NgoJH16ORFHP (100% identity) | S.Ngo9125ORF2205P | |
| 2220 | R | NgoSH240ORFMP (100% identity) | Ngo9125ORF2205P | |
| 2225 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3785 | replication-associated recombination protein A | |||
| 3790 | R | NgoSH240ORFBP (100% identity) | GAGNNNNNTAC | Ngo9125ORF3815P |
| 3795 | hydroxyacid dehydrogenase | |||
| 3800 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo9125ORF3815P |
| 3805 | 186 aa hypothetical protein | |||
| 3810 | 279 aa hypothetical protein | |||
| 3815 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo9125ORF3815P |
| 3820 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1595 | phenylalanine--tRNA ligase subunit alpha | |||
| 1600 | V | V.NgoWSORF391P (100% identity) | V.Ngo9125ORF1605P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo9125ORF1605P | |
| 1615 | R | NgoWSORF391P (100% identity) | Ngo9125ORF1605P | |
| 1620 | phenylalanine--tRNA ligase subunit beta | |||
| 1915 | IS1595 family transposase | |||
| 1920 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo9125ORF1920P |
| 1925 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo9125ORF1920P |
| 1930 | 141 aa hypothetical protein | |||
| 1950 | uroporphyrinogen decarboxylase | |||
| 1955 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo9125ORF1965P | |
| 1960 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo9125ORF1965P |
| 1965 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo9125ORF1965P |
| 1970 | 78 aa hypothetical protein | |||
| 3675 | 3-isopropylmalate dehydrogenase | |||
| 3680 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo9125ORF3685P |
| 3685 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo9125ORF3685P |
| 3690 | 3-isopropylmalate dehydratase small subunit | |||
| 5075 | anthranilate synthase component I | |||
| 5080 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo9125ORF5080P |
| 5085 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo9125ORF5080P |
| 5090 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6600 | replication initiation factor | |||
| 6605 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo9125ORF6615P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo9125ORF6615P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo9125ORF6615P | |
| 6625 | 48 aa hypothetical protein | |||
| 6845 | excinuclease ABC subunit UvrA | |||
| 6850 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo9125ORF6855P |
| 6855 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo9125ORF6855P |
| 6860 | transposase | |||
| 10465 | FUSC family protein | |||
| 10470 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo9125ORF10475P |
| 10475 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo9125ORF10475P |
| 10480 | ribosome recycling factor | |||
| 11055 | 93 aa hypothetical protein | |||
| 11060 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo9125ORF11065P |
| 11065 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo9125ORF11065P |
| 11070 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo9125ORF11065P |
| 11075 | RNA-binding transcriptional accessory protein | |||
| 11730 | GTPase ObgE | |||
| 11735 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo9125ORF11735P |
| 11740 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo9125ORF11735P |
| 11745 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2965 | peptidyl-prolyl cis-trans isomerase | |||
| 2970 | M | M.NgoSH229ORFNP (97% identity) | CCACC | M.Ngo9125ORF2970P |
| 2975 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo9125ORF2970P |
| 2980 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3465 | alpha-hydroxy-acid oxidizing protein | |||
| 3470 | R | NgoSH240ORFJP (100% identity) | Ngo9125ORF3475P | |
| ??? | M | M.NgoSH240ORFJP (100% identity) | M.Ngo9125ORF3475P | |
| 3485 | tRNA pseudouridine(55) synthase TruB | |||