Neisseria gonorrhoeae NJ1711654 |
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Putative Neisseria gonorrhoeae NJ1711654 RM systems
Ref: Zhao,Y. et al. unpublished
REBASE ref # 29424
Complete sequence: 2,215,121 bp
GenBank #: CP041585
REBASE acronym: Ngo11654
Org_num: 37064
All begin FNL98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7435 | ABC transporter | |||
| 7440 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo11654ORF7440P |
| 7445 | 279 aa hypothetical protein | |||
| 7450 | 186 aa hypothetical protein | |||
| 7455 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo11654ORF7440P |
| 7460 | hydroxyacid dehydrogenase | |||
| 7465 | R | NgoSH240ORFBP (100% identity) | GAGNNNNNTAC | Ngo11654ORF7440P |
| 7470 | replication-associated recombination protein A | |||
| 9025 | ATP-dependent Clp protease ATP-binding subunit | |||
| 9030 | R | NgoSH240ORFMP (100% identity) | Ngo11654ORF9050P | |
| 9035 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.Ngo11654ORF9050P |
| 9040 | S | S1.Ngo9ORF2950P (100% identity) | GCANNNNNNNNTGC | S2.Ngo11654ORF9050P |
| 9045 | DNA damage-inducible protein D | |||
| 9050 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo11654ORF9050P | |
| 9055 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | RNA-binding transcriptional accessory protein | |||
| 180 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo11654ORF180P |
| 185 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo11654ORF180P |
| 190 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo11654ORF180P |
| 195 | 93 aa hypothetical protein | |||
| 775 | ribosome recycling factor | |||
| 780 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo11654ORF780P |
| 785 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo11654ORF780P |
| 790 | FUSC family protein | |||
| 4405 | transposase | |||
| 4410 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo11654ORF4410P |
| 4415 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo11654ORF4410P |
| 4420 | excinuclease ABC subunit UvrA | |||
| 4635 | 48 aa hypothetical protein | |||
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo11654ORF4640P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo11654ORF4640P | |
| 4655 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo11654ORF4640P | |
| 4660 | replication initiation factor | |||
| 6175 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6180 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo11654ORF6185P |
| 6185 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo11654ORF6185P |
| 6190 | anthranilate synthase component I | |||
| 7565 | 3-isopropylmalate dehydratase small subunit | |||
| 7570 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo11654ORF7570P |
| 7575 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo11654ORF7570P |
| 7580 | 3-isopropylmalate dehydrogenase | |||
| 9285 | 0 aa hypothetical protein | |||
| 9290 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo11654ORF9290P |
| 9295 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo11654ORF9290P |
| 9300 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo11654ORF9290P | |
| 9305 | uroporphyrinogen decarboxylase | |||
| 9325 | 141 aa hypothetical protein | |||
| 9330 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo11654ORF9335P |
| 9335 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo11654ORF9335P |
| 9340 | IS1595 family transposase | |||
| 9635 | phenylalanine--tRNA ligase subunit beta | |||
| 9640 | R | NgoWSORF391P (100% identity) | Ngo11654ORF9650P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo11654ORF9650P | |
| 9655 | V | V.NgoWSORF391P (100% identity) | V.Ngo11654ORF9650P | |
| 9660 | phenylalanine--tRNA ligase subunit alpha | |||
| 11370 | 0 aa hypothetical protein | |||
| 11375 | M | M.Ngos1291ORF5755P (100% identity) | M.Ngo11654ORF11375P | |
| 11380 | DNA adenine methylase | |||
| 11385 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo11654ORF11375P |
| 11390 | leucine--tRNA ligase | |||
| 12580 | cysteine--tRNA ligase | |||
| 12585 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo11654ORF12590P |
| 12590 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo11654ORF12590P |
| 12595 | GTPase ObgE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7770 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngos1291ORF8930P (76% identity) | M.Ngo11654ORF7775P | |
| 7785 | R | NgoSH240ORFJP (100% identity) | Ngo11654ORF7775P | |
| 7790 | alpha-hydroxy-acid oxidizing protein | |||
| 8275 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 8280 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo11654ORF8285P |
| 8285 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo11654ORF8285P |
| 8290 | peptidyl-prolyl cis-trans isomerase | |||