Halolamina species CBA1230 |
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Putative Halolamina species CBA1230 RM systems
Ref: Kim,J.Y. and Roh,S.W. unpublished
REBASE ref # 30781
| Sequence length: | GenBank #: | |
| Chromosome: | 3,472,516 bp | MWUK00000000 (NZ_MWUK00000000) |
| Chromosome: | 2,904,575 bp | CP054587 |
| plasmid pCBA1230-01: | 254,488 bp | CP054588 |
| plasmid pCBA1230-02: | 253,363 bp | CP054589 |
REBASE acronym: Hsp1230
Org_num: 41491
All begin B4589_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14415 | metal-dependent hydrolase | |||
| 14420 | R | HspJT49ORF9170P (94% identity) | Hsp1230ORF13535P | |
| 14425 | S | S.HspSHR3ORFAP (44% identity) | S.Hsp1230ORF13535P | |
| 14430 | M | M.SspHSJ1ORFBP (93% identity) | M.Hsp1230ORF13535P | |
| 14435 | 98 aa hypothetical protein | |||
| Chromosome | ||||
| 13520 | M48 family metallopeptidase | |||
| 13525 | R | HspJT49ORF9170P (94% identity) | Hsp1230ORF13535P | |
| 13530 | S | S.HspSHR3ORFAP (44% identity) | S.Hsp1230ORF13535P | |
| 13535 | M | M.SspHSJ1ORFBP (93% identity) | M.Hsp1230ORF13535P | |
| 13540 | 180 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 600 | integrase | |||
| 605 | RM | Noc4ORF1186P (49% identity) | Hsp1230ORF15585P | |
| 610 | 76 aa hypothetical protein | |||
| 17045 | helicase | |||
| 17050 | RM | Ssp196ORFCP (62% identity) | Hsp1230ORF17020P | |
| 17055 | 63 aa hypothetical protein | |||
| 5675 | DEAD/DEAH box helicase | |||
| 5680 | M | M.Hti4BORF3128P (73% identity) | M.Hsp1230ORF4525P | |
| 5685 | 206 aa hypothetical protein | |||
| 10815 | 199 aa hypothetical protein | |||
| ??? | RM | Hsp71ORFAP (93% identity) | Hsp1230ORF9810P | |
| 10825 | 80 aa hypothetical protein | |||
| 13640 | integrase | |||
| 13645 | RM | Hsi33800ORF9291P (94% identity) | Hsp1230ORF12720P | |
| 13650 | response regulator of citrate/malate metabolism | |||
| Chromosome | ||||
| 4520 | DEAD/DEAH box helicase family protein | |||
| 4525 | M | M.Hti4BORF3128P (73% identity) | M.Hsp1230ORF4525P | |
| 4530 | 206 aa hypothetical protein | |||
| 9805 | site-specific integrase | |||
| ??? | RM | Hsp71ORFAP (93% identity) | Hsp1230ORF9810P | |
| 9815 | 148 aa hypothetical protein | |||
| 12715 | 352 aa hypothetical protein | |||
| 12720 | RM | Hsi33800ORF9291P (94% identity) | Hsp1230ORF12720P | |
| 12725 | 195 aa hypothetical protein | |||
| plasmid pCBA1230-01 | ||||
| 15580 | 2,3-butanediol dehydrogenase | |||
| 15585 | RM | Noc4ORF1186P (49% identity) | Hsp1230ORF15585P | |
| 15590 | tyrosine-type recombinase/integrase | |||
| plasmid pCBA1230-02 | ||||
| 17015 | 63 aa hypothetical protein | |||
| 17020 | RM | Ssp196ORFCP (62% identity) | Hsp1230ORF17020P | |
| 17025 | DEAD/DEAH box helicase family protein | |||