Tardiphaga species vice304 |
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Putative Tardiphaga species vice304 RM systems
Ref: Zeng,Y. unpublished
REBASE ref # 29413
Complete sequence: 5,788,809 bp
GenBank #: CP041402
REBASE acronym: Tsp304
Org_num: 37039
All begin FNL56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9110 | 494 aa hypothetical protein | |||
| 9115 | R | RpaBORF3652P (74% identity) | Tsp304ORF9120P | |
| 9120 | M | M.RpaBORF3652P (85% identity) | M.Tsp304ORF9120P | |
| 9125 | S | S.SyaF8ORF15705P (41% identity) | S.Tsp304ORF9120P | |
| 9130 | trypsin-like peptidase domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5190 | 188 aa hypothetical protein | |||
| 5195 | M | M.Tsp352ORF5310P (99% identity) | M.Tsp304ORF5195P | |
| 5200 | gamma-glutamyl-gamma-aminobutyrate hydrolase | |||
| 7200 | 251 aa hypothetical protein | |||
| 7205 | M | M.Tsp352ORF7255P (91% identity) | M.Tsp304ORF7205P | |
| 7210 | FAD-dependent monooxygenase | |||
| 7495 | ISL3 family transposase | |||
| 7500 | R | Tsp352ORF7180P (100% identity) | Tsp304ORF7500P | |
| 7505 | AIPR family protein | |||
| 7535 | ATP-binding protein | |||
| 7540 | M | M.Tsp352ORF7210P (100% identity) | M.Tsp304ORF7540P | |
| 7545 | V | V.Tsp352ORF7210P (99% identity) | V.Tsp304ORF7540P | |
| 7550 | 280 aa hypothetical protein | |||
| 7595 | 252 aa hypothetical protein | |||
| 7600 | M | M.Tsp352ORF7255P (100% identity) | M.Tsp304ORF7600P | |
| 7605 | GntR family transcriptional regulator | |||
| 9100 | 163 aa hypothetical protein | |||
| 9105 | M | M.Tsp352ORF8925P (75% identity) | M.Tsp304ORF9105P | |
| 9110 | 494 aa hypothetical protein | |||
| 9730 | 163 aa hypothetical protein | |||
| 9735 | M | M.Tsp352ORF8925P (100% identity) | M.Tsp304ORF9735P | |
| 9740 | IS3 family transposase | |||
| 13295 | 81 aa hypothetical protein | |||
| 13300 | M | M.MspSC2ORF1626P (35% identity) | M.Tsp304ORF13300P | |
| 13305 | 105 aa hypothetical protein | |||
| 13860 | ATP-dependent helicase | |||
| 13865 | RM | MspLW5ORFFP (51% identity) | Tsp304ORF13865P | |
| 13870 | 223 aa hypothetical protein | |||
| 24800 | ImmA/IrrE family metallo-endopeptidase | |||
| 24805 | R | Tsp352ORF24055P (100% identity) | Tsp304ORF24805P | |
| 24810 | type II toxin-antitoxin system RelB/DinJ family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11440 | isocitrate lyase/phosphoenolpyruvate mutase | |||
| 11445 | M | M.Tsp278ORF11295AP (22% identity) | M.Tsp304ORF11445AP | |
| 11450 | IS3 family transposase | |||
| 11455 | M | M.Tsp352ORF10610BP (100% identity) | M.Tsp304ORF11445BP | |
| 11460 | R | Tsp278ORF11295P (99% identity) | Tsp304ORF11445P | |
| 11465 | IS5 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24515 | metalloprotease | |||
| 24520 | M | M.Tsp352ORF23770P (100% identity) | M.Tsp304ORF24520P | |
| 24525 | chemotaxis protein | |||