Rhodoferax species Gr-4 |
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Putative Rhodoferax species Gr-4 RM systems
Ref: Jin,L. unpublished
REBASE ref # 29107
Complete sequence: 4,737,690 bp
GenBank #: CP036282
REBASE acronym: RspGr4
Org_num: 37027
All begin EXZ61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5445 | restriction endonuclease | |||
| 5450 | M | M.Psp3121III (93% identity) | M.RspGr4ORF5450P | |
| 5455 | S | S.AalK520ORF15930P (67% identity) | S.RspGr4ORF5450P | |
| 5460 | restriction endonuclease | |||
| 5465 | restriction endonuclease | |||
| 5470 | R | AphORF1873P (81% identity) | RspGr4ORF5450P | |
| 5475 | 361 aa hypothetical protein | |||
| 12920 | 151 aa hypothetical protein | |||
| 12925 | R | BspPML1ORF5770P (47% identity) | RspGr4ORF12940P | |
| 12930 | 80 aa hypothetical protein | |||
| 12935 | S | S.StiAZ3aORF3824P (34% identity) | S.RspGr4ORF12940P | |
| 12940 | M | M.RfeDORF1365P (49% identity) | M.RspGr4ORF12940P | |
| 12945 | 230 aa hypothetical protein | |||
| 21005 | 190 aa hypothetical protein | |||
| 21010 | M | M.Sma133ORF19470P (92% identity) | M.RspGr4ORF21010P | |
| 21015 | S | S.Sma133ORF19470P (58% identity) | S.RspGr4ORF21010P | |
| 21020 | 297 aa hypothetical protein | |||
| 21025 | R | Sma133ORF19470P (95% identity) | RspGr4ORF21010P | |
| 21030 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2620 | Com family DNA-binding transcriptional | |||
| 2625 | M | M.CspAEP13ORF457P (97% identity) | M.RspGr4ORF2625P | |
| 2630 | MFS transporter | |||
| 6915 | DNA topoisomerase IV subunit A | |||
| 6920 | M | M.PpeCLAP6ORFDP (59% identity) | M.RspGr4ORF6920P | |
| 6925 | 574 aa hypothetical protein | |||
| 12890 | ATP-binding protein | |||
| 12895 | M | M.CoxT2IV (71% identity) | M.RspGr4ORF12895P | |
| 12900 | R | AspP4ORF20810P (94% identity) | RspGr4ORF12895P | |
| 12905 | WYL domain-containing protein | |||
| 18170 | Com family DNA-binding transcriptional | |||
| 18175 | M | M.RspGr4ORF2625P (93% identity) | M.RspGr4ORF18175P | |
| 18180 | ABC transporter ATP-binding protein | |||
| 20855 | 241 aa hypothetical protein | |||
| 20860 | M | M.CbaOS4ORF300P (87% identity) | M.RspGr4ORF20860P | |
| 20865 | DMT family transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 575 | ATP-dependent helicase | |||
| 580 | M | M.CbaAAWORFKP (69% identity) | M.RspGr4ORF580P | |
| 585 | DUF1016 domain-containing protein | |||
| 590 | R | CbaAAWORFKP (92% identity) | RspGr4ORF580P | |
| 595 | thioredoxin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5455 | restriction endonuclease subunit S | |||
| 5460 | R | Psp26590McrBP (42% identity) | RspGr4McrBP | |
| 5465 | R | AcaCH129McrCP (55% identity) | RspGr4McrCP | |
| 5470 | type I restriction endonuclease subunit R | |||