Escherichia coli ATCC 43889 |
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Putative Escherichia coli ATCC 43889 RM systems
Ref: Hwang,D. et al. unpublished
REBASE ref # 29291
| Sequence length: | GenBank #: | |
| Chromosome: | 5,567,434 bp | CP015853 |
| plasmid unnamed: | 92,854 bp | CP015854 |
REBASE acronym: Eco43889
Org_num: 36671
All begin A8714_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14390 | 94 aa hypothetical protein | |||
| 14395 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco43889ORF14400P |
| 14400 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco43889ORF14400P |
| 14405 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco43889ORF14400P |
| 14410 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 640 | phosphohydrolase | |||
| 645 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco43889DcmP |
| 650 | V | V.EcosPA8DcmP (100% identity) | V.Eco43889DcmP | |
| 655 | drug/metabolite exporter YedA | |||
| 5015 | 648 aa hypothetical protein | |||
| 5020 | M | M.Eco8512ORF7295P (99% identity) | M.Eco43889ORF5020P | |
| 5025 | TrmB family transcriptional regulator | |||
| 5375 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 5390 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco43889ORF5390P | |
| 5395 | TrmB family transcriptional regulator | |||
| 14670 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco43889ORF14670P |
| 14675 | helicase | |||
| 14705 | N-acetylneuraminate epimerase | |||
| 14710 | R | EcosPA8ORF17350P (100% identity) | Eco43889ORF14710P | |
| 14715 | low calcium response protein S | |||
| 15955 | Eae protein | |||
| 15960 | M | M.EcoLSU61ORF26180P (59% identity) | M.Eco43889ORF15960AP | |
| 15965 | M | M.EcoTWORF5132P (28% identity) | M.Eco43889ORF15960BP | |
| 15970 | 65 aa hypothetical protein | |||
| 20185 | cell division protein DamX | |||
| 20190 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco43889DamP |
| 20195 | ribulose-phosphate 3-epimerase | |||
| 20735 | 59 aa hypothetical protein | |||
| 20740 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco43889ORF20740P |
| 20745 | Fis family transcriptional regulator | |||
| 25570 | 70 aa hypothetical protein | |||
| 25575 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco43889ORF25575P |
| 25580 | regulator | |||
| 25700 | 215 aa hypothetical protein | |||
| 25705 | R | Sso1099IP (100% identity) | CTGCAG | Eco43889ORF25710P |
| 25710 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco43889ORF25710P |
| 25715 | repressor | |||
| 28435 | ninB protein | |||
| 28440 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco43889ORF28440P |
| 28445 | protein ninE | |||
| plasmid unnamed | ||||
| 29080 | 101 aa hypothetical protein | |||
| 29085 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco43889ORF29085P | |
| 29090 | 73 aa hypothetical protein | |||