Salmonella enterica subsp. enterica serovar Newport SAP18-8729 |
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Putative Salmonella enterica subsp. enterica serovar Newport SAP18-8729 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 29010
| Sequence length: | GenBank #: | |
| Chromosome: | 4,795,996 bp | CP041208 |
| plasmid pCFSAN074384_1: | 158,212 bp | CP041209 |
REBASE acronym: Sen8729
Org_num: 35713
All begin D2X89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19965 | 322 aa hypothetical protein | |||
| 19970 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen8729ORF19975P |
| 19975 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen8729ORF19975P |
| 19980 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.Sen8729ORF19975P |
| 19985 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.StyTDamP (100% identity) | GATC | M.Sen8729DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 domain-containing protein | |||
| 2255 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8729ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 9160 | phosphohydrolase | |||
| 9165 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen8729DcmP |
| 9170 | V | V.StyTDcmP (100% identity) | V.Sen8729DcmP | |
| 9175 | drug/metabolite exporter YedA | |||
| 14095 | 112 aa hypothetical protein | |||
| ??? | M | M.SenNORF1143P (100% identity) | M.Sen8729ORF14100P | |
| 14110 | 82 aa hypothetical protein | |||
| plasmid pCFSAN074384_1 | ||||
| 23800 | 100 aa hypothetical protein | |||
| 23805 | M | M.YrupYR1ORFCP (100% identity) | M.Sen8729ORF23805P | |
| 23810 | 158 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17720 | 33 aa hypothetical protein | |||
| 17725 | R | Ssp6947IIP (100% identity) | CAGAG | Sen8729ORF17730P |
| 17730 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen8729ORF17730P |
| 17735 | MFS transporter | |||