Citrobacter species CF971 |
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Putative Citrobacter species CF971 RM systems
Ref: Xu,Z. and Chen,D. unpublished
REBASE ref # 28820
| Sequence length: | GenBank #: | |
| Chromosome: | 4,955,441 bp | CP041051 |
| plasmid pBM527-1: | 301,036 bp | CP041047 |
REBASE acronym: CspCF971
Org_num: 34842
All begin E6P06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5895 | 0 aa hypothetical protein | |||
| 5900 | R | Cpo1222ORF23450P (100% identity) | CspCF971ORF5910P | |
| 5905 | S | S.Eho916ORF18625P (100% identity) | S.CspCF971ORF5910P | |
| 5910 | M | M.CpoF321ORF20640P (100% identity) | M.CspCF971ORF5910P | |
| 5915 | DUF262 domain-containing protein | |||
| 6860 | 5-nucleotidase | |||
| 6865 | S | S.CpoK218ORF24245P (99% identity) | S.CspCF971ORF6870P | |
| 6870 | M | M.CpoK218ORF24245P (100% identity) | M.CspCF971ORF6870P | |
| 6875 | R | CpoK218ORF24245P (100% identity) | CspCF971ORF6870P | |
| 6880 | toll/interleukin-1 receptor domain-containing | |||
| 7150 | endoribonuclease SymE | |||
| 7155 | S | S.CfrCF2ORF21645P (100% identity) | S.CspCF971ORF7160P | |
| 7160 | M | M.CfrCF2ORF21645P (100% identity) | M.CspCF971ORF7160P | |
| 7165 | R | CfrCF2ORF21645P (100% identity) | CspCF971ORF7160P | |
| 7170 | restriction endonuclease | |||
| 21575 | transposase | |||
| 21580 | M | M.Eko50119ORF5695P (100% identity) | TTCANNNNNNTCG | M.CspCF971ORF21580P |
| 21585 | S | S.Rpl430I (100% identity) | TTCANNNNNNTCG | S.CspCF971ORF21580P |
| 21590 | R | Rpl430IP (99% identity) | TTCANNNNNNTCG | CspCF971ORF21580P |
| 21595 | 197 aa hypothetical protein | |||
| 23565 | IS1 family transposase | |||
| 23570 | M | M.CsaCO4ORF11690P (72% identity) | M.CspCF971ORF23570P | |
| 23575 | bifunctional glutathionylspermidine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5240 | GntR family transcriptional regulator | |||
| 5245 | M | M.Cfr13639ORF5310P (99% identity) | M.CspCF971ORF5245P | |
| 5250 | RusA family crossover junction | |||
| 17870 | drug/metabolite exporter YedA | |||
| 17875 | V | V.CspS39ORF13780P (100% identity) | V.CspCF971ORF17880P | |
| 17880 | M | M.CfrCF2ORF9715P (100% identity) | CCWGG | M.CspCF971ORF17880P |
| 17885 | phosphohydrolase | |||
| 20770 | Pyocin large subunit | |||
| 20775 | M | M.Sen7697ORF6005P (88% identity) | M.CspCF971ORF20775P | |
| 20780 | 67 aa hypothetical protein | |||
| 20835 | DUF1382 family protein | |||
| 20840 | M | M.Cfr7308ORF7120P (99% identity) | M.CspCF971ORF20840P | |
| 20845 | DUF4102 domain-containing protein | |||
| 25005 | DNA-binding transcriptional regulator Fis | |||
| 25010 | M | M.CspS39ORF6865P (51% identity) | M.CspCF971ORF25010P | |
| 25015 | acrEF/envCD operon transcriptional regulator | |||
| 25550 | ribulose-phosphate 3-epimerase | |||
| 25555 | M | M.Eco5172DamP (100% identity) | GATC | M.CspCF971DamP |
| 25560 | cell division protein DamX | |||
| plasmid pBM527-1 | ||||
| 535 | resolvase | |||
| 540 | R | YpsR2ORFAP (100% identity) | CCWGG | CspCF971ORF545P |
| 545 | M | M1.Eho5ORF26025P (100% identity) | CCWGG | M.CspCF971ORF545P |
| 550 | IS1 family transposase | |||
| 750 | DNA polymerase III subunit beta | |||
| 755 | M | M.Sen3039ORF24445P (100% identity) | M.CspCF971ORF755P | |
| 760 | 76 aa hypothetical protein | |||