Rhodococcus ruber R1 |
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Putative Rhodococcus ruber R1 RM systems
Ref: Donoso,R. et al. unpublished
REBASE ref # 29971
Complete sequence: 5,352,622 bp
GenBank #: CP038030
REBASE acronym: RruR1
Org_num: 38674
All begin E2561_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21790 | 267 aa hypothetical protein | |||
| 21795 | S | S.RruC1ORF24420P (99% identity) | S.RruR1ORF21800P | |
| 21800 | M | M.RspP14ORFCP (44% identity) | M.RruR1ORF21800P | |
| 21805 | 690 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 510 | alpha/beta hydrolase | |||
| 515 | R | RbiB403ORF23220P (89% identity) | RruR1ORF520P | |
| 520 | M | M.RbiB403ORF23220P (97% identity) | M.RruR1ORF520P | |
| 525 | DDE-type integrase/transposase/recombinase | |||
| 1510 | TSUP family transporter | |||
| 1515 | V | V.RspAHZY2ORF25790P (100% identity) | V.RruR1ORF1520P | |
| 1520 | M | M.RspP14ORFGP (90% identity) | M.RruR1ORF1520P | |
| 1525 | 82 aa hypothetical protein | |||
| 7955 | AAA domain-containing protein | |||
| 7960 | RM | RspGA1ORFCP (56% identity) | RruR1ORF7960P | |
| 7965 | DEAD/DEAH box helicase | |||
| 11065 | 713 aa hypothetical protein | |||
| 11075 | RM | RaeP1ORF12795P (91% identity) | RruR1ORF11075P | |
| 11080 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 495 | transposase | |||
| 500 | R | RruR1McrC3P (100% identity) | RruR1McrC2P | |
| 505 | R | RruR1McrB3P (100% identity) | RruR1McrB2P | |
| 510 | alpha/beta hydrolase | |||
| 495 | transposase | |||
| 500 | R | RruR1McrC2P (100% identity) | RruR1McrC3P | |
| 505 | R | RruR1McrB2P (100% identity) | RruR1McrB3P | |
| 510 | alpha/beta hydrolase | |||
| 7945 | AAA family ATPase | |||
| 7950 | R | RspGA1McrC2P (92% identity) | RruR1McrCP | |
| 7955 | R | RspGA1McrB2P (61% identity) | RruR1McrBP | |
| 7960 | N-6 DNA methylase | |||